Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS19480 and HGI48_RS19485 are separated by 148 nucleotidesHGI48_RS19485 and HGI48_RS19490 are separated by 188 nucleotidesHGI48_RS19490 and HGI48_RS19495 are separated by 211 nucleotidesHGI48_RS19495 and HGI48_RS19500 are separated by 70 nucleotides HGI48_RS19480: HGI48_RS19480 - nitrate ABC transporter substrate-binding protein, at 4,350,750 to 4,351,712 _RS19480 HGI48_RS19485: HGI48_RS19485 - aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme, at 4,351,861 to 4,353,219 _RS19485 HGI48_RS19490: HGI48_RS19490 - FKBP-type peptidyl-prolyl cis-trans isomerase, at 4,353,408 to 4,354,265 _RS19490 HGI48_RS19495: HGI48_RS19495 - SlyX family protein, at 4,354,477 to 4,354,695 _RS19495 HGI48_RS19500: HGI48_RS19500 - AraC family transcriptional regulator, at 4,354,766 to 4,355,809 _RS19500
Group Condition HGI48_RS19480 HGI48_RS19485 HGI48_RS19490 HGI48_RS19495 HGI48_RS19500
control PDB -0.3 -0.1 -0.3 N.D. -0.2
control PDB -0.4 -0.2 -0.2 N.D. -0.0
control PDB -0.1 -0.1 -0.1 N.D. -0.4
control PDB +0.0 -0.1 -0.2 N.D. -0.2
carbon source M9+glycerol -0.6 +0.1 +0.5 N.D. -0.4
plant Upstate -0.1 +0.1 +0.0 N.D. -0.3
carbon source M9+sucrose -0.6 -0.3 +0.6 N.D. -0.1
carbon source M9+glycerol -0.4 -0.1 +0.4 N.D. -0.2
carbon source M9+polygalacturonate -0.7 +0.0 +0.4 N.D. +0.0
plant Upstate -0.2 +0.0 +0.2 N.D. -0.2
carbon source M9+sucrose -0.4 -0.1 +0.4 N.D. -0.0
plant Upstate -0.1 -0.2 +0.3 N.D. -0.0
carbon source M9+polygalacturonate -0.9 +0.0 +0.5 N.D. +0.3
plant Atlantic -0.3 +0.1 +0.4 N.D. -0.2
control LB +0.1 -0.1 +0.2 N.D. -0.2
carbon source M9+polygalacturonate -0.6 +0.0 +0.6 N.D. -0.0
plant Norland -0.2 +0.1 +0.4 N.D. -0.2
plant Upstate -0.1 +0.1 +0.2 N.D. -0.0
carbon source M9+sucrose -0.4 +0.0 +0.7 N.D. +0.1
carbon source M9+glycerol +0.2 +0.1 +0.5 N.D. -0.2
plant Atlantic -0.1 -0.0 +0.7 N.D. +0.1
plant Norland +0.2 +0.2 +0.5 N.D. -0.2
carbon source M9+glycerol -0.3 +0.0 +0.7 N.D. +0.2
plant Atlantic +0.1 -0.1 +0.8 N.D. -0.1
plant Norland +0.1 -0.1 +0.7 N.D. +0.1
carbon source M9+glycerol +0.0 +0.2 +0.8 N.D. -0.2
plant Atlantic +0.1 +0.2 +0.4 N.D. +0.1
plant Norland +0.3 +0.1 +0.4 N.D. +0.1
plant Atlantic -0.0 -0.1 +1.0 N.D. +0.3
plant Atlantic +0.3 +0.0 +1.1 N.D. +0.0
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