Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS19000 and HGI48_RS19005 are separated by 349 nucleotidesHGI48_RS19005 and HGI48_RS19010 are separated by 119 nucleotidesHGI48_RS19010 and HGI48_RS19015 are separated by 137 nucleotidesHGI48_RS19015 and HGI48_RS19020 are separated by 79 nucleotides HGI48_RS19000: HGI48_RS19000 - amino acid adenylation domain-containing protein, at 4,265,138 to 4,266,673 _RS19000 HGI48_RS19005: HGI48_RS19005 - transposase, at 4,267,023 to 4,267,271 _RS19005 HGI48_RS19010: HGI48_RS19010 - LysR family transcriptional regulator, at 4,267,391 to 4,268,293 _RS19010 HGI48_RS19015: HGI48_RS19015 - SDR family oxidoreductase, at 4,268,431 to 4,269,177 _RS19015 HGI48_RS19020: HGI48_RS19020 - glutathione S-transferase family protein, at 4,269,257 to 4,269,931 _RS19020
Group Condition HGI48_RS19000 HGI48_RS19005 HGI48_RS19010 HGI48_RS19015 HGI48_RS19020
carbon source M9+polygalacturonate -0.1 N.D. -0.1 -0.2 -0.3
control PDB -0.2 N.D. -0.2 -0.1 +0.0
control PDB -0.1 N.D. -0.5 +0.1 +0.0
carbon source M9+polygalacturonate -0.0 N.D. -0.3 -0.0 -0.1
control PDB -0.0 N.D. -0.4 -0.2 +0.2
carbon source M9+glycerol -0.1 N.D. -0.3 +0.1 +0.1
carbon source M9+sucrose -0.4 N.D. -0.2 +0.0 +0.3
control PDB +0.0 N.D. -0.2 +0.2 -0.2
carbon source M9+glycerol +0.2 N.D. -0.1 -0.2 +0.0
plant Upstate -0.1 N.D. +0.1 +0.1 -0.1
control PDB -0.1 N.D. -0.1 +0.2 +0.0
plant Upstate +0.0 N.D. -0.2 -0.0 +0.3
carbon source M9+polygalacturonate +0.2 N.D. -0.2 -0.1 +0.1
plant Atlantic -0.0 N.D. +0.1 +0.3 -0.3
carbon source M9+sucrose +0.2 N.D. -0.1 -0.1 +0.2
plant Norland +0.1 N.D. +0.1 +0.2 -0.1
plant Atlantic -0.1 N.D. +0.1 +0.3 -0.0
control PDB +0.2 N.D. -0.1 +0.1 +0.0
carbon source M9+glycerol -0.1 N.D. -0.0 +0.1 +0.2
plant Atlantic +0.3 N.D. -0.1 +0.0 +0.1
plant Norland +0.1 N.D. +0.0 +0.0 +0.3
control LB +0.1 N.D. +0.0 +0.1 +0.2
plant Upstate +0.2 N.D. -0.0 +0.0 +0.2
plant Norland +0.0 N.D. -0.0 +0.2 +0.3
plant Atlantic +0.3 N.D. +0.0 -0.1 +0.3
plant Upstate +0.2 N.D. -0.0 +0.0 +0.2
plant Norland +0.2 N.D. +0.0 +0.1 +0.2
carbon source M9+glycerol +0.3 N.D. +0.0 -0.1 +0.5
plant Upstate +0.1 N.D. +0.1 +0.1 +0.5
plant Atlantic +0.3 N.D. +0.0 +0.3 +0.5
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