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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS18980 and HGI48_RS18985 overlap by 1 nucleotides
HGI48_RS18985 and HGI48_RS18990 are separated by 13 nucleotides
HGI48_RS18990 and HGI48_RS18995 are separated by 63 nucleotides
HGI48_RS18995 and HGI48_RS19000 are separated by 3 nucleotides
HGI48_RS18980: HGI48_RS18980 - DMT family transporter, at 4,262,249 to 4,263,169
_RS18980
HGI48_RS18985: HGI48_RS18985 - alanyl-tRNA synthetase, at 4,263,169 to 4,263,843
_RS18985
HGI48_RS18990: HGI48_RS18990 - chlorinating enzyme, at 4,263,857 to 4,264,804
_RS18990
HGI48_RS18995: HGI48_RS18995 - hypothetical protein, at 4,264,868 to 4,265,134
_RS18995
HGI48_RS19000: HGI48_RS19000 - amino acid adenylation domain-containing protein, at 4,265,138 to 4,266,673
_RS19000
Group
Condition
HGI48
_RS18980
HGI48
_RS18985
HGI48
_RS18990
HGI48
_RS18995
HGI48
_RS19000
control
PDB
-0.1
-0.3
-0.4
N.D.
-0.1
carbon source
M9+sucrose
-0.1
-0.6
+0.2
N.D.
-0.4
control
LB
+0.0
-0.6
-0.1
N.D.
-0.1
carbon source
M9+sucrose
-0.4
-0.5
+0.1
N.D.
+0.0
control
PDB
+0.1
-0.5
-0.3
N.D.
-0.1
plant
Norland
+0.1
-0.4
-0.4
N.D.
+0.0
control
PDB
-0.0
-0.3
-0.0
N.D.
-0.2
carbon source
M9+sucrose
+0.0
-0.4
-0.4
N.D.
+0.2
carbon source
M9+polygalacturonate
-0.0
-0.2
-0.2
N.D.
-0.1
plant
Norland
-0.0
-0.3
-0.2
N.D.
+0.1
carbon source
M9+glycerol
+0.2
-0.3
-0.4
N.D.
+0.0
plant
Atlantic
+0.2
-0.3
-0.1
N.D.
+0.1
carbon source
M9+glycerol
+0.2
-0.4
-0.1
N.D.
+0.2
carbon source
M9+polygalacturonate
+0.1
-0.3
+0.1
N.D.
-0.0
carbon source
M9+polygalacturonate
-0.1
-0.2
+0.1
N.D.
+0.2
carbon source
M9+glycerol
-0.1
+0.4
-0.5
N.D.
+0.3
plant
Upstate
+0.2
-0.4
+0.2
N.D.
+0.0
plant
Norland
+0.2
-0.3
+0.1
N.D.
+0.1
plant
Norland
+0.1
+0.5
-0.4
N.D.
+0.0
control
LB
+0.0
+0.2
-0.2
N.D.
+0.1
control
PDB
+0.1
-0.2
+0.1
N.D.
+0.2
plant
Norland
+0.2
-0.1
-0.1
N.D.
+0.2
carbon source
M9+glycerol
+0.3
-0.0
+0.1
N.D.
-0.1
plant
Upstate
+0.1
+0.3
-0.3
N.D.
+0.2
plant
Upstate
+0.2
+0.2
-0.0
N.D.
-0.1
control
PDB
+0.2
+0.3
-0.1
N.D.
-0.0
plant
Atlantic
+0.3
+0.4
-0.6
N.D.
+0.3
plant
Atlantic
+0.0
+0.2
-0.0
N.D.
+0.3
plant
Atlantic
+0.2
+0.6
-0.4
N.D.
-0.0
plant
Atlantic
+0.3
+0.6
-0.1
N.D.
+0.3
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