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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS18610 and HGI48_RS18615 overlap by 4 nucleotides
HGI48_RS18615 and HGI48_RS18620 are separated by 50 nucleotides
HGI48_RS18620 and HGI48_RS18625 are separated by 46 nucleotides
HGI48_RS18625 and HGI48_RS18630 are separated by 128 nucleotides
HGI48_RS18610: HGI48_RS18610 - GDP-L-fucose synthase, at 4,177,136 to 4,178,074
_RS18610
HGI48_RS18615: HGI48_RS18615 - hypothetical protein, at 4,178,071 to 4,179,270
_RS18615
HGI48_RS18620: HGI48_RS18620 - glycosyltransferase, at 4,179,321 to 4,180,448
_RS18620
HGI48_RS18625: HGI48_RS18625 - D-2-hydroxyacid dehydrogenase, at 4,180,495 to 4,181,421
_RS18625
HGI48_RS18630: HGI48_RS18630 - tRNA-Gly, at 4,181,550 to 4,181,625
_RS18630
Group
Condition
HGI48
_RS18610
HGI48
_RS18615
HGI48
_RS18620
HGI48
_RS18625
HGI48
_RS18630
plant
Upstate
-1.9
-0.7
-1.0
+0.1
N.D.
plant
Atlantic
-0.6
-1.1
-0.6
-0.1
N.D.
plant
Atlantic
-0.4
-0.4
-0.9
-0.4
N.D.
plant
Upstate
-1.1
-0.9
-0.2
+0.3
N.D.
control
PDB
-0.3
-0.7
-0.7
-0.1
N.D.
plant
Norland
-1.6
-0.1
-0.3
+0.3
N.D.
control
PDB
-0.8
-0.4
-0.4
-0.0
N.D.
plant
Norland
-1.6
-0.1
-0.1
+0.1
N.D.
plant
Upstate
-1.1
-0.2
-0.1
+0.1
N.D.
plant
Upstate
-0.3
-0.4
-0.5
-0.1
N.D.
control
PDB
-1.0
-0.6
+0.6
-0.1
N.D.
plant
Upstate
-0.5
-0.7
+0.0
+0.3
N.D.
plant
Atlantic
-0.9
-0.2
+0.1
+0.1
N.D.
control
PDB
-0.5
-0.3
-0.2
+0.4
N.D.
plant
Norland
-0.5
+0.4
+0.3
+0.1
N.D.
carbon source
M9+sucrose
-0.8
+0.6
+1.0
-0.2
N.D.
plant
Atlantic
-0.5
+0.6
+0.5
+0.2
N.D.
plant
Norland
-0.1
+0.2
+0.9
+0.1
N.D.
carbon source
M9+sucrose
-0.5
+0.7
+1.2
-0.2
N.D.
plant
Atlantic
-0.1
+0.6
+1.1
+0.4
N.D.
carbon source
M9+polygalacturonate
+0.2
+1.0
+1.0
-0.1
N.D.
carbon source
M9+glycerol
+0.4
+1.7
+1.0
-0.1
N.D.
carbon source
M9+sucrose
+0.5
+1.2
+1.3
+0.2
N.D.
carbon source
M9+polygalacturonate
+0.8
+1.1
+1.2
+0.1
N.D.
carbon source
M9+glycerol
+0.7
+1.5
+1.8
+0.2
N.D.
carbon source
M9+glycerol
+0.6
+1.8
+1.7
+0.2
N.D.
carbon source
M9+glycerol
+0.6
+1.9
+1.9
+0.2
N.D.
carbon source
M9+glycerol
+1.2
+1.8
+1.5
+0.2
N.D.
carbon source
M9+glycerol
+1.6
+2.5
+2.7
+0.2
N.D.
carbon source
M9+polygalacturonate
+0.8
+3.2
+3.1
-0.0
N.D.
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