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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS18450 and HGI48_RS18455 are separated by 381 nucleotides
HGI48_RS18455 and HGI48_RS18460 are separated by 241 nucleotides
HGI48_RS18460 and HGI48_RS18465 overlap by 8 nucleotides
HGI48_RS18465 and HGI48_RS18470 are separated by 176 nucleotides
HGI48_RS18450: HGI48_RS18450 - transketolase, at 4,142,062 to 4,144,056
_RS18450
HGI48_RS18455: HGI48_RS18455 - MFS transporter TsgA, at 4,144,438 to 4,145,631
_RS18455
HGI48_RS18460: HGI48_RS18460 - biosynthetic arginine decarboxylase, at 4,145,873 to 4,147,849
_RS18460
HGI48_RS18465: HGI48_RS18465 - hypothetical protein, at 4,147,842 to 4,148,000
_RS18465
HGI48_RS18470: HGI48_RS18470 - hypothetical protein, at 4,148,177 to 4,148,518
_RS18470
Group
Condition
HGI48
_RS18450
HGI48
_RS18455
HGI48
_RS18460
HGI48
_RS18465
HGI48
_RS18470
control
PDB
N.D.
-0.1
-0.4
-0.2
-0.2
control
LB
N.D.
-0.3
-0.0
-0.5
-0.2
control
PDB
N.D.
-0.1
-0.2
-0.4
-0.1
carbon source
M9+glycerol
N.D.
-0.0
+0.0
-0.2
-0.5
carbon source
M9+glycerol
N.D.
-0.2
+0.0
-0.6
-0.0
control
PDB
N.D.
-0.2
-0.2
-0.3
-0.0
plant
Upstate
N.D.
-0.2
+0.1
-0.3
-0.3
control
PDB
N.D.
-0.2
-0.3
-0.4
+0.2
control
PDB
N.D.
-0.1
-0.4
-0.3
+0.2
control
LB
N.D.
-0.3
+0.1
-0.2
-0.1
control
LB
N.D.
-0.3
+0.0
-0.4
+0.2
plant
Atlantic
N.D.
-0.2
-0.1
-0.6
+0.6
carbon source
M9+glycerol
N.D.
-0.1
+0.3
-0.4
+0.0
plant
Norland
N.D.
-0.1
+0.3
-0.1
-0.3
control
PDB
N.D.
-0.1
-0.4
+0.5
-0.1
carbon source
M9+sucrose
N.D.
+0.1
+0.3
-0.5
-0.0
plant
Atlantic
N.D.
-0.1
+0.3
+0.1
-0.1
carbon source
M9+sucrose
N.D.
+0.2
+0.4
-0.4
+0.2
plant
Norland
N.D.
-0.1
+0.2
-0.2
+0.5
plant
Norland
N.D.
-0.0
+0.0
-0.1
+0.5
plant
Norland
N.D.
-0.2
+0.2
-0.1
+0.4
plant
Norland
N.D.
-0.0
+0.2
-0.1
+0.4
plant
Upstate
N.D.
+0.0
+0.2
+0.2
+0.3
carbon source
M9+sucrose
N.D.
+0.1
+0.4
+0.1
+0.1
carbon source
M9+glycerol
N.D.
+0.1
+0.4
-0.2
+0.5
plant
Atlantic
N.D.
+0.1
+0.2
+0.2
+0.3
carbon source
M9+polygalacturonate
N.D.
+0.1
+0.5
+0.1
+0.2
carbon source
M9+polygalacturonate
N.D.
+0.2
+0.4
-0.2
+0.6
plant
Atlantic
N.D.
-0.1
+0.4
+0.3
+0.4
carbon source
M9+polygalacturonate
N.D.
+0.0
+0.7
+0.3
+0.3
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