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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS18075 and HGI48_RS18080 are separated by 250 nucleotides
HGI48_RS18080 and HGI48_RS18085 are separated by 96 nucleotides
HGI48_RS18085 and HGI48_RS18090 are separated by 127 nucleotides
HGI48_RS18090 and HGI48_RS18095 are separated by 111 nucleotides
HGI48_RS18075: HGI48_RS18075 - siderophore-interacting protein, at 4,056,971 to 4,057,873
_RS18075
HGI48_RS18080: HGI48_RS18080 - tryptophanase leader peptide, at 4,058,124 to 4,058,234
_RS18080
HGI48_RS18085: HGI48_RS18085 - tryptophanase, at 4,058,331 to 4,059,731
_RS18085
HGI48_RS18090: HGI48_RS18090 - glucose uptake inhibitor SgrT, at 4,059,859 to 4,060,017
_RS18090
HGI48_RS18095: HGI48_RS18095 - HTH-type transcriptional regulator SgrR, at 4,060,129 to 4,061,796
_RS18095
Group
Condition
HGI48
_RS18075
HGI48
_RS18080
HGI48
_RS18085
HGI48
_RS18090
HGI48
_RS18095
plant
Atlantic
-1.1
N.D.
-0.1
-2.0
+0.6
carbon source
M9+glycerol
-1.9
N.D.
-0.1
-0.1
+0.1
carbon source
M9+glycerol
-1.9
N.D.
+0.2
-0.2
-0.1
carbon source
M9+glycerol
-1.7
N.D.
-0.1
-0.1
+0.1
control
PDB
-1.5
N.D.
-0.0
-0.3
+0.1
carbon source
M9+sucrose
-2.0
N.D.
-0.2
+0.4
+0.2
plant
Norland
-1.7
N.D.
-0.2
+0.3
+0.0
carbon source
M9+glycerol
-1.1
N.D.
-0.0
+0.4
-0.3
plant
Norland
-0.9
N.D.
+0.0
+0.2
-0.1
plant
Upstate
-0.9
N.D.
+0.1
+0.3
-0.1
plant
Atlantic
-0.8
N.D.
+0.0
+0.2
+0.0
carbon source
M9+glycerol
-0.9
N.D.
-0.0
+0.6
-0.2
plant
Norland
-1.3
N.D.
+0.2
+0.5
+0.1
plant
Norland
-0.8
N.D.
-0.2
+0.6
-0.0
control
PDB
-0.9
N.D.
-0.2
+0.2
+0.4
plant
Norland
-0.6
N.D.
+0.1
+0.3
-0.1
plant
Upstate
-0.7
N.D.
+0.1
+0.4
-0.1
carbon source
M9+polygalacturonate
-0.5
N.D.
-0.0
+0.4
+0.1
plant
Atlantic
-1.1
N.D.
+0.6
+0.5
-0.1
control
LB
-0.4
N.D.
-0.1
+0.6
+0.0
control
PDB
-0.8
N.D.
+0.1
+0.9
+0.0
plant
Atlantic
-1.1
N.D.
-0.0
+1.2
+0.1
plant
Atlantic
-0.5
N.D.
+0.3
+0.5
+0.2
control
PDB
-0.6
N.D.
+0.3
+0.7
+0.2
plant
Norland
-0.1
N.D.
+0.1
+0.7
+0.1
plant
Upstate
-0.2
N.D.
+0.1
+0.9
+0.3
control
LB
+0.4
N.D.
+0.1
+0.5
+0.3
carbon source
M9+polygalacturonate
+0.8
N.D.
+0.1
+0.3
+0.2
control
PDB
-0.3
N.D.
+0.1
+1.6
+0.2
plant
Upstate
+0.7
N.D.
+0.2
+0.8
-0.1
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