Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS18075 and HGI48_RS18080 are separated by 250 nucleotidesHGI48_RS18080 and HGI48_RS18085 are separated by 96 nucleotidesHGI48_RS18085 and HGI48_RS18090 are separated by 127 nucleotidesHGI48_RS18090 and HGI48_RS18095 are separated by 111 nucleotides HGI48_RS18075: HGI48_RS18075 - siderophore-interacting protein, at 4,056,971 to 4,057,873 _RS18075 HGI48_RS18080: HGI48_RS18080 - tryptophanase leader peptide, at 4,058,124 to 4,058,234 _RS18080 HGI48_RS18085: HGI48_RS18085 - tryptophanase, at 4,058,331 to 4,059,731 _RS18085 HGI48_RS18090: HGI48_RS18090 - glucose uptake inhibitor SgrT, at 4,059,859 to 4,060,017 _RS18090 HGI48_RS18095: HGI48_RS18095 - HTH-type transcriptional regulator SgrR, at 4,060,129 to 4,061,796 _RS18095
Group Condition HGI48_RS18075 HGI48_RS18080 HGI48_RS18085 HGI48_RS18090 HGI48_RS18095
plant Atlantic -1.1 N.D. -0.1 -2.0 +0.6
carbon source M9+glycerol -1.9 N.D. -0.1 -0.1 +0.1
carbon source M9+glycerol -1.9 N.D. +0.2 -0.2 -0.1
carbon source M9+glycerol -1.7 N.D. -0.1 -0.1 +0.1
control PDB -1.5 N.D. -0.0 -0.3 +0.1
carbon source M9+sucrose -2.0 N.D. -0.2 +0.4 +0.2
plant Norland -1.7 N.D. -0.2 +0.3 +0.0
carbon source M9+glycerol -1.1 N.D. -0.0 +0.4 -0.3
plant Norland -0.9 N.D. +0.0 +0.2 -0.1
plant Upstate -0.9 N.D. +0.1 +0.3 -0.1
plant Atlantic -0.8 N.D. +0.0 +0.2 +0.0
carbon source M9+glycerol -0.9 N.D. -0.0 +0.6 -0.2
plant Norland -1.3 N.D. +0.2 +0.5 +0.1
plant Norland -0.8 N.D. -0.2 +0.6 -0.0
control PDB -0.9 N.D. -0.2 +0.2 +0.4
plant Norland -0.6 N.D. +0.1 +0.3 -0.1
plant Upstate -0.7 N.D. +0.1 +0.4 -0.1
carbon source M9+polygalacturonate -0.5 N.D. -0.0 +0.4 +0.1
plant Atlantic -1.1 N.D. +0.6 +0.5 -0.1
control LB -0.4 N.D. -0.1 +0.6 +0.0
control PDB -0.8 N.D. +0.1 +0.9 +0.0
plant Atlantic -1.1 N.D. -0.0 +1.2 +0.1
plant Atlantic -0.5 N.D. +0.3 +0.5 +0.2
control PDB -0.6 N.D. +0.3 +0.7 +0.2
plant Norland -0.1 N.D. +0.1 +0.7 +0.1
plant Upstate -0.2 N.D. +0.1 +0.9 +0.3
control LB +0.4 N.D. +0.1 +0.5 +0.3
carbon source M9+polygalacturonate +0.8 N.D. +0.1 +0.3 +0.2
control PDB -0.3 N.D. +0.1 +1.6 +0.2
plant Upstate +0.7 N.D. +0.2 +0.8 -0.1
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