Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS17900 and HGI48_RS17905 are separated by 9 nucleotidesHGI48_RS17905 and HGI48_RS17910 are separated by 105 nucleotidesHGI48_RS17910 and HGI48_RS17915 are separated by 167 nucleotidesHGI48_RS17915 and HGI48_RS17920 overlap by 8 nucleotides HGI48_RS17900: HGI48_RS17900 - type II secretion system protein GspE, at 4,017,121 to 4,018,596 _RS17900 HGI48_RS17905: HGI48_RS17905 - protein transport protein HofC, at 4,018,606 to 4,019,811 _RS17905 HGI48_RS17910: HGI48_RS17910 - GMP reductase, at 4,019,917 to 4,020,957 _RS17910 HGI48_RS17915: HGI48_RS17915 - dephospho-CoA kinase, at 4,021,125 to 4,021,751 _RS17915 HGI48_RS17920: HGI48_RS17920 - cell division protein ZapD, at 4,021,744 to 4,022,493 _RS17920
Group Condition HGI48_RS17900 HGI48_RS17905 HGI48_RS17910 HGI48_RS17915 HGI48_RS17920
carbon source M9+glycerol -0.3 -0.2 -0.5 N.D. -0.4
carbon source M9+sucrose -0.2 -0.2 -0.3 N.D. -0.5
carbon source M9+glycerol -0.3 +0.0 -0.2 N.D. -0.5
carbon source M9+glycerol -0.3 -0.2 -0.1 N.D. -0.2
carbon source M9+glycerol -0.2 -0.0 +0.1 N.D. -0.6
plant Norland +0.2 -0.1 -0.5 N.D. -0.2
carbon source M9+glycerol -0.1 -0.3 +0.1 N.D. -0.2
carbon source M9+sucrose +0.1 -0.2 -0.2 N.D. -0.2
plant Norland -0.2 -0.1 -0.1 N.D. -0.0
plant Atlantic +0.2 -0.2 -0.3 N.D. -0.1
carbon source M9+glycerol -0.0 +0.0 +0.1 N.D. -0.4
control PDB -0.2 +0.1 -0.2 N.D. +0.1
plant Atlantic -0.2 -0.2 +0.1 N.D. +0.2
plant Norland -0.0 -0.3 +0.1 N.D. +0.0
control PDB -0.2 -0.1 -0.1 N.D. +0.2
carbon source M9+sucrose -0.1 +0.2 +0.1 N.D. -0.3
control PDB -0.0 -0.1 +0.1 N.D. -0.1
plant Norland +0.1 -0.3 +0.0 N.D. +0.1
carbon source M9+polygalacturonate +0.1 -0.1 +0.1 N.D. -0.1
plant Upstate -0.1 +0.2 +0.1 N.D. -0.2
plant Norland -0.1 +0.1 +0.0 N.D. +0.1
plant Upstate -0.1 +0.2 -0.1 N.D. +0.0
plant Upstate -0.2 +0.2 -0.0 N.D. +0.2
plant Upstate -0.0 +0.3 -0.1 N.D. +0.0
control LB -0.0 -0.1 +0.2 N.D. +0.2
carbon source M9+polygalacturonate +0.3 -0.0 +0.1 N.D. +0.1
control PDB +0.2 +0.1 +0.2 N.D. +0.0
plant Atlantic +0.1 -0.2 +0.4 N.D. +0.2
plant Atlantic +0.2 +0.3 +0.1 N.D. -0.0
plant Atlantic -0.2 +0.2 +0.3 N.D. +0.2
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