Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS17850 and HGI48_RS17855 are separated by 132 nucleotidesHGI48_RS17855 and HGI48_RS17860 are separated by 224 nucleotidesHGI48_RS17860 and HGI48_RS17865 are separated by 208 nucleotidesHGI48_RS17865 and HGI48_RS17870 are separated by 124 nucleotides HGI48_RS17850: HGI48_RS17850 - pyruvate dehydrogenase (acetyl-transferring), homodimeric type, at 4,006,960 to 4,009,623 _RS17850 HGI48_RS17855: HGI48_RS17855 - pyruvate dehydrogenase complex transcriptional repressor PdhR, at 4,009,756 to 4,010,520 _RS17855 HGI48_RS17860: HGI48_RS17860 - hypothetical protein, at 4,010,745 to 4,010,960 _RS17860 HGI48_RS17865: HGI48_RS17865 - amino acid permease, at 4,011,169 to 4,012,515 _RS17865 HGI48_RS17870: HGI48_RS17870 - beta-lactamase regulator AmpE, at 4,012,640 to 4,013,494 _RS17870
Group Condition HGI48_RS17850 HGI48_RS17855 HGI48_RS17860 HGI48_RS17865 HGI48_RS17870
carbon source M9+polygalacturonate N.D. +0.0 -0.6 -0.0 -0.9
carbon source M9+polygalacturonate N.D. -0.3 -0.5 -0.0 -0.6
carbon source M9+sucrose N.D. +0.0 -0.8 -0.0 -0.4
carbon source M9+sucrose N.D. +0.3 -0.9 -0.2 -0.3
carbon source M9+glycerol N.D. -0.1 -0.1 +0.0 -0.7
carbon source M9+sucrose N.D. +0.5 -1.2 -0.0 -0.2
carbon source M9+glycerol N.D. -0.1 -0.3 +0.2 -0.7
carbon source M9+polygalacturonate N.D. +0.1 -0.1 -0.1 -0.3
plant Atlantic N.D. -0.4 +0.4 -0.1 -0.3
plant Atlantic N.D. -0.3 +0.0 -0.1 +0.1
plant Upstate N.D. -0.1 +0.3 -0.3 -0.2
control PDB N.D. -0.1 -0.1 +0.2 -0.1
control PDB N.D. +0.2 -0.3 +0.2 -0.3
plant Atlantic N.D. +0.2 -0.3 -0.2 +0.1
control PDB N.D. +0.1 -0.2 +0.1 -0.1
plant Norland N.D. -0.1 +0.2 +0.1 -0.3
carbon source M9+glycerol N.D. +0.4 -0.0 +0.2 -0.6
plant Atlantic N.D. -0.2 +0.4 +0.1 -0.3
control LB N.D. +0.3 +0.0 +0.1 -0.3
carbon source M9+glycerol N.D. +0.5 +0.1 +0.2 -0.6
plant Upstate N.D. +0.3 +0.4 -0.1 -0.4
control PDB N.D. +0.5 -0.3 +0.1 -0.1
plant Norland N.D. +0.2 +0.1 +0.2 -0.2
plant Atlantic N.D. +0.4 +0.2 +0.1 -0.3
plant Upstate N.D. +0.1 +0.4 +0.0 -0.1
plant Upstate N.D. +0.2 +0.2 -0.0 +0.2
control LB N.D. +0.4 +0.2 -0.0 -0.1
plant Norland N.D. +0.6 +0.2 +0.0 -0.2
plant Upstate N.D. +0.3 +0.5 +0.0 -0.2
control LB N.D. +0.4 +0.1 +0.1 -0.1
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