Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS17660 and HGI48_RS17665 are separated by 12 nucleotidesHGI48_RS17665 and HGI48_RS17670 are separated by 385 nucleotidesHGI48_RS17670 and HGI48_RS17675 are separated by 2 nucleotidesHGI48_RS17675 and HGI48_RS17680 are separated by 69 nucleotides HGI48_RS17660: HGI48_RS17660 - peptidoglycan-binding protein, at 3,952,612 to 3,953,259 _RS17660 HGI48_RS17665: HGI48_RS17665 - type VI secretion system tip protein VgrG, at 3,953,272 to 3,955,062 _RS17665 HGI48_RS17670: HGI48_RS17670 - PAAR domain-containing protein, at 3,955,448 to 3,955,747 _RS17670 HGI48_RS17675: HGI48_RS17675 - GPW/gp25 family protein, at 3,955,750 to 3,956,169 _RS17675 HGI48_RS17680: HGI48_RS17680 - baseplate J/gp47 family protein, at 3,956,239 to 3,960,330 _RS17680
Group Condition HGI48_RS17660 HGI48_RS17665 HGI48_RS17670 HGI48_RS17675 HGI48_RS17680
plant Atlantic -0.1 -0.1 N.D. N.D. -0.3
plant Upstate -0.5 +0.0 N.D. N.D. -0.0
plant Norland -0.1 -0.1 N.D. N.D. -0.0
control LB -0.2 -0.1 N.D. N.D. +0.1
control LB -0.3 +0.1 N.D. N.D. -0.0
carbon source M9+glycerol -0.3 +0.1 N.D. N.D. -0.0
plant Norland -0.4 +0.1 N.D. N.D. +0.1
control LB -0.2 +0.0 N.D. N.D. +0.1
carbon source M9+glycerol -0.3 -0.0 N.D. N.D. +0.2
plant Upstate -0.2 -0.0 N.D. N.D. +0.1
plant Norland -0.2 +0.1 N.D. N.D. +0.0
carbon source M9+glycerol +0.1 -0.2 N.D. N.D. +0.0
carbon source M9+glycerol -0.1 +0.2 N.D. N.D. -0.1
plant Atlantic +0.1 -0.3 N.D. N.D. +0.2
plant Upstate -0.2 +0.2 N.D. N.D. +0.0
carbon source M9+glycerol -0.1 +0.2 N.D. N.D. +0.0
carbon source M9+sucrose -0.2 -0.1 N.D. N.D. +0.3
control PDB -0.1 +0.0 N.D. N.D. +0.1
control PDB -0.3 +0.3 N.D. N.D. +0.1
plant Upstate -0.0 +0.0 N.D. N.D. +0.2
control PDB +0.2 -0.2 N.D. N.D. +0.1
carbon source M9+sucrose -0.1 +0.2 N.D. N.D. +0.1
plant Atlantic +0.1 +0.2 N.D. N.D. -0.0
plant Norland +0.0 +0.2 N.D. N.D. +0.1
carbon source M9+polygalacturonate +0.1 +0.2 N.D. N.D. +0.1
plant Norland -0.0 +0.2 N.D. N.D. +0.2
plant Atlantic +0.1 +0.2 N.D. N.D. +0.1
control PDB +0.2 +0.1 N.D. N.D. +0.1
plant Atlantic +0.6 -0.1 N.D. N.D. +0.0
carbon source M9+sucrose +0.3 +0.0 N.D. N.D. +0.2
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