Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS17480 and HGI48_RS17485 are separated by 246 nucleotidesHGI48_RS17485 and HGI48_RS17490 are separated by 112 nucleotidesHGI48_RS17490 and HGI48_RS17495 are separated by 60 nucleotidesHGI48_RS17495 and HGI48_RS17500 are separated by 5 nucleotides HGI48_RS17480: HGI48_RS17480 - thioesterase, at 3,913,478 to 3,914,275 _RS17480 HGI48_RS17485: HGI48_RS17485 - diaminopimelate decarboxylase, at 3,914,522 to 3,915,793 _RS17485 HGI48_RS17490: HGI48_RS17490 - LysR family transcriptional regulator, at 3,915,906 to 3,916,853 _RS17490 HGI48_RS17495: HGI48_RS17495 - Fic family protein, at 3,916,914 to 3,918,254 _RS17495 HGI48_RS17500: HGI48_RS17500 - ABC transporter ATP-binding protein, at 3,918,260 to 3,919,252 _RS17500
Group Condition HGI48_RS17480 HGI48_RS17485 HGI48_RS17490 HGI48_RS17495 HGI48_RS17500
carbon source M9+polygalacturonate +0.1 -2.4 -0.4 -0.3 -0.2
carbon source M9+sucrose -0.6 -2.2 -0.2 +0.0 +0.1
carbon source M9+sucrose +0.1 -1.7 -1.0 +0.0 -0.3
carbon source M9+polygalacturonate +0.0 -2.8 +0.2 +0.1 +0.1
carbon source M9+sucrose +0.1 -1.7 -0.1 -0.3 -0.2
carbon source M9+polygalacturonate -0.1 -1.4 -0.5 +0.1 -0.1
carbon source M9+glycerol -0.4 -1.3 -0.3 +0.1 +0.1
carbon source M9+glycerol -0.1 -1.3 +0.1 +0.1 -0.1
plant Atlantic +0.2 -1.1 +0.3 +0.3 -0.9
carbon source M9+glycerol -0.3 -0.7 +0.2 -0.2 -0.2
control PDB -0.1 -0.1 -0.3 -0.4 -0.1
carbon source M9+glycerol +0.0 -1.2 +0.3 -0.1 +0.0
control PDB +0.0 -0.1 -0.3 +0.1 -0.6
plant Atlantic +0.8 -0.8 -0.0 -0.0 -0.8
plant Atlantic -0.4 -0.7 +0.1 +0.1 +0.2
plant Norland -0.2 -0.2 -0.2 -0.2 +0.2
plant Norland +0.5 -0.7 -0.5 -0.1 +0.2
plant Atlantic -0.1 -0.3 +0.2 -0.1 -0.2
carbon source M9+glycerol +0.0 -0.7 +0.2 -0.3 +0.2
control PDB +0.3 -0.1 -0.4 -0.2 -0.1
plant Norland -0.2 -0.3 +0.2 +0.0 -0.2
plant Upstate +0.2 -0.6 +0.2 +0.1 -0.2
plant Upstate -0.0 -0.7 +0.3 +0.0 +0.0
carbon source M9+glycerol +0.3 -0.9 -0.2 +0.2 +0.2
plant Upstate +0.2 -0.5 -0.2 +0.0 +0.2
plant Atlantic +0.5 -1.0 +0.0 +0.4 -0.2
plant Upstate +0.1 -0.6 +0.3 +0.1 +0.0
plant Atlantic +0.3 -0.6 +0.2 +0.1 -0.2
plant Norland +0.5 -0.4 +0.0 -0.0 +0.1
plant Upstate +0.3 -0.5 +0.2 +0.1 +0.2
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