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Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS17235 and HGI48_RS17240 are separated by 235 nucleotides
HGI48_RS17240 and HGI48_RS17245 are separated by 136 nucleotides
HGI48_RS17245 and HGI48_RS17250 are separated by 117 nucleotides
HGI48_RS17250 and HGI48_RS17255 are separated by 248 nucleotides
HGI48_RS17235: HGI48_RS17235 - 3'(2'),5'-bisphosphate nucleotidase CysQ, at 3,863,665 to 3,864,405
_RS17235
HGI48_RS17240: HGI48_RS17240 - bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase, at 3,864,641 to 3,866,587
_RS17240
HGI48_RS17245: HGI48_RS17245 - iron-sulfur cluster repair protein YtfE, at 3,866,724 to 3,867,389
_RS17245
HGI48_RS17250: HGI48_RS17250 - DUF2502 domain-containing protein, at 3,867,507 to 3,867,872
_RS17250
HGI48_RS17255: HGI48_RS17255 - FKBP-type peptidyl-prolyl cis-trans isomerase, at 3,868,121 to 3,868,741
_RS17255
Group
Condition
HGI48
_RS17235
HGI48
_RS17240
HGI48
_RS17245
HGI48
_RS17250
HGI48
_RS17255
plant
Atlantic
-2.0
+0.0
+0.2
-0.0
-0.8
carbon source
M9+polygalacturonate
-1.5
+0.1
-0.4
-0.4
-0.3
plant
Atlantic
-1.0
+0.3
-0.6
-0.4
-0.6
carbon source
M9+polygalacturonate
-1.4
-0.3
-0.2
-0.0
-0.1
plant
Atlantic
-1.1
-0.3
-0.6
+0.1
-0.2
plant
Norland
-1.2
+0.1
-0.6
-0.1
-0.2
carbon source
M9+sucrose
-1.9
+0.2
-0.0
-0.0
-0.3
carbon source
M9+sucrose
-2.0
+0.3
+0.2
-0.3
-0.2
carbon source
M9+glycerol
-1.7
+0.1
+0.4
-0.6
+0.1
plant
Norland
-1.4
+0.1
+0.1
-0.1
-0.2
plant
Upstate
-1.3
-0.0
-0.3
+0.2
-0.0
carbon source
M9+glycerol
-1.1
-0.2
+0.0
-0.0
-0.1
carbon source
M9+sucrose
-1.3
+0.1
+0.3
-0.2
-0.2
plant
Atlantic
-0.8
+0.0
-0.3
+0.0
-0.1
control
LB
-0.8
-0.2
+0.2
-0.3
-0.1
plant
Norland
-0.3
-0.1
-0.2
-0.2
-0.1
carbon source
M9+glycerol
-1.5
-0.1
+0.2
-0.0
+0.4
carbon source
M9+polygalacturonate
-1.4
+0.3
+0.2
+0.1
-0.1
plant
Norland
-1.3
-0.2
+0.4
+0.2
-0.0
plant
Norland
-0.4
-0.1
-0.5
+0.2
+0.0
plant
Atlantic
-0.2
-0.3
-0.3
-0.1
+0.2
plant
Upstate
-0.8
-0.1
-0.0
+0.3
+0.1
plant
Upstate
-0.4
-0.1
-0.1
+0.2
-0.2
control
PDB
+0.4
-0.0
-0.9
+0.1
-0.1
carbon source
M9+glycerol
-1.1
-0.1
+0.1
-0.0
+0.6
control
PDB
+0.1
-0.1
-0.6
+0.0
+0.3
control
PDB
+0.0
+0.1
-0.5
-0.1
+0.2
control
PDB
+0.2
-0.2
+0.2
-0.4
+0.3
carbon source
M9+glycerol
-0.2
-0.2
+0.5
-0.1
+0.2
control
PDB
+0.7
-0.1
-0.4
+0.1
+0.4
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