Fitness for 5 genes in Dickeya dianthicola 67-19

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 39 experiments or choose conditions or try the comparative fitness browser

500 ntHGI48_RS17235 and HGI48_RS17240 are separated by 235 nucleotidesHGI48_RS17240 and HGI48_RS17245 are separated by 136 nucleotidesHGI48_RS17245 and HGI48_RS17250 are separated by 117 nucleotidesHGI48_RS17250 and HGI48_RS17255 are separated by 248 nucleotides HGI48_RS17235: HGI48_RS17235 - 3'(2'),5'-bisphosphate nucleotidase CysQ, at 3,863,665 to 3,864,405 _RS17235 HGI48_RS17240: HGI48_RS17240 - bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase, at 3,864,641 to 3,866,587 _RS17240 HGI48_RS17245: HGI48_RS17245 - iron-sulfur cluster repair protein YtfE, at 3,866,724 to 3,867,389 _RS17245 HGI48_RS17250: HGI48_RS17250 - DUF2502 domain-containing protein, at 3,867,507 to 3,867,872 _RS17250 HGI48_RS17255: HGI48_RS17255 - FKBP-type peptidyl-prolyl cis-trans isomerase, at 3,868,121 to 3,868,741 _RS17255
Group Condition HGI48_RS17235 HGI48_RS17240 HGI48_RS17245 HGI48_RS17250 HGI48_RS17255
plant Atlantic -2.0 +0.0 +0.2 -0.0 -0.8
carbon source M9+polygalacturonate -1.5 +0.1 -0.4 -0.4 -0.3
plant Atlantic -1.0 +0.3 -0.6 -0.4 -0.6
carbon source M9+polygalacturonate -1.4 -0.3 -0.2 -0.0 -0.1
plant Atlantic -1.1 -0.3 -0.6 +0.1 -0.2
plant Norland -1.2 +0.1 -0.6 -0.1 -0.2
carbon source M9+sucrose -1.9 +0.2 -0.0 -0.0 -0.3
carbon source M9+sucrose -2.0 +0.3 +0.2 -0.3 -0.2
carbon source M9+glycerol -1.7 +0.1 +0.4 -0.6 +0.1
plant Norland -1.4 +0.1 +0.1 -0.1 -0.2
plant Upstate -1.3 -0.0 -0.3 +0.2 -0.0
carbon source M9+glycerol -1.1 -0.2 +0.0 -0.0 -0.1
carbon source M9+sucrose -1.3 +0.1 +0.3 -0.2 -0.2
plant Atlantic -0.8 +0.0 -0.3 +0.0 -0.1
control LB -0.8 -0.2 +0.2 -0.3 -0.1
plant Norland -0.3 -0.1 -0.2 -0.2 -0.1
carbon source M9+glycerol -1.5 -0.1 +0.2 -0.0 +0.4
carbon source M9+polygalacturonate -1.4 +0.3 +0.2 +0.1 -0.1
plant Norland -1.3 -0.2 +0.4 +0.2 -0.0
plant Norland -0.4 -0.1 -0.5 +0.2 +0.0
plant Atlantic -0.2 -0.3 -0.3 -0.1 +0.2
plant Upstate -0.8 -0.1 -0.0 +0.3 +0.1
plant Upstate -0.4 -0.1 -0.1 +0.2 -0.2
control PDB +0.4 -0.0 -0.9 +0.1 -0.1
carbon source M9+glycerol -1.1 -0.1 +0.1 -0.0 +0.6
control PDB +0.1 -0.1 -0.6 +0.0 +0.3
control PDB +0.0 +0.1 -0.5 -0.1 +0.2
control PDB +0.2 -0.2 +0.2 -0.4 +0.3
carbon source M9+glycerol -0.2 -0.2 +0.5 -0.1 +0.2
control PDB +0.7 -0.1 -0.4 +0.1 +0.4
remove
HGI48_RS17235
plot
remove
HGI48_RS17240
plot
remove
HGI48_RS17245
remove
HGI48_RS17250
plot
remove
HGI48_RS17255
plot