Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS17140 and HGI48_RS17145 are separated by 7 nucleotidesHGI48_RS17145 and HGI48_RS17150 are separated by 11 nucleotidesHGI48_RS17150 and HGI48_RS17155 are separated by 133 nucleotidesHGI48_RS17155 and HGI48_RS17160 are separated by 112 nucleotides HGI48_RS17140: HGI48_RS17140 - DUF3820 family protein, at 3,839,565 to 3,839,783 _RS17140 HGI48_RS17145: HGI48_RS17145 - NAD-dependent DNA ligase LigA, at 3,839,791 to 3,841,842 _RS17145 HGI48_RS17150: HGI48_RS17150 - bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE, at 3,841,854 to 3,843,281 _RS17150 HGI48_RS17155: HGI48_RS17155 - bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase, at 3,843,415 to 3,846,306 _RS17155 HGI48_RS17160: HGI48_RS17160 - inorganic triphosphatase, at 3,846,419 to 3,847,750 _RS17160
Group Condition HGI48_RS17140 HGI48_RS17145 HGI48_RS17150 HGI48_RS17155 HGI48_RS17160
carbon source M9+polygalacturonate -0.8 N.D. N.D. -0.8 -0.1
carbon source M9+polygalacturonate -0.6 N.D. N.D. -0.5 -0.1
carbon source M9+sucrose -0.4 N.D. N.D. -0.0 -0.8
carbon source M9+polygalacturonate -0.0 N.D. N.D. -0.9 -0.1
carbon source M9+sucrose -0.3 N.D. N.D. -0.1 -0.5
plant Atlantic -0.5 N.D. N.D. +0.0 -0.2
carbon source M9+glycerol -0.2 N.D. N.D. -0.3 -0.0
plant Upstate -0.3 N.D. N.D. +0.0 -0.2
plant Norland -0.4 N.D. N.D. +0.1 -0.2
plant Upstate -0.6 N.D. N.D. -0.1 +0.4
carbon source M9+glycerol +0.1 N.D. N.D. -0.2 -0.2
carbon source M9+glycerol -0.1 N.D. N.D. -0.5 +0.3
plant Norland -0.3 N.D. N.D. +0.1 +0.0
control PDB -0.3 N.D. N.D. -0.1 +0.3
plant Atlantic -0.3 N.D. N.D. +0.4 -0.1
plant Norland -0.4 N.D. N.D. +0.3 +0.0
carbon source M9+sucrose -0.0 N.D. N.D. +0.7 -0.8
control PDB -0.2 N.D. N.D. -0.3 +0.4
carbon source M9+glycerol -0.2 N.D. N.D. -0.1 +0.3
control PDB -0.4 N.D. N.D. -0.1 +0.5
carbon source M9+glycerol -0.1 N.D. N.D. -0.1 +0.3
control LB -0.1 N.D. N.D. -0.1 +0.3
plant Upstate -0.2 N.D. N.D. -0.0 +0.2
plant Upstate -0.2 N.D. N.D. -0.0 +0.3
plant Norland -0.2 N.D. N.D. +0.2 +0.1
control LB +0.1 N.D. N.D. -0.1 +0.1
plant Atlantic -0.3 N.D. N.D. +0.3 +0.2
control PDB -0.4 N.D. N.D. +0.0 +0.6
control PDB +0.0 N.D. N.D. -0.0 +0.4
control PDB -0.0 N.D. N.D. -0.2 +0.6
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