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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS16975 and HGI48_RS16980 are separated by 215 nucleotides
HGI48_RS16980 and HGI48_RS16985 are separated by 121 nucleotides
HGI48_RS16985 and HGI48_RS16990 are separated by 118 nucleotides
HGI48_RS16990 and HGI48_RS16995 are separated by 11 nucleotides
HGI48_RS16975: HGI48_RS16975 - cell division protein FtsB, at 3,796,886 to 3,797,224
_RS16975
HGI48_RS16980: HGI48_RS16980 - DUF3561 family protein, at 3,797,440 to 3,797,793
_RS16980
HGI48_RS16985: HGI48_RS16985 - adenylyl-sulfate kinase, at 3,797,915 to 3,798,493
_RS16985
HGI48_RS16990: HGI48_RS16990 - sulfate adenylyltransferase subunit CysN, at 3,798,612 to 3,800,039
_RS16990
HGI48_RS16995: HGI48_RS16995 - sulfate adenylyltransferase subunit CysD, at 3,800,051 to 3,800,959
_RS16995
Group
Condition
HGI48
_RS16975
HGI48
_RS16980
HGI48
_RS16985
HGI48
_RS16990
HGI48
_RS16995
carbon source
M9+polygalacturonate
N.D.
-0.3
-2.3
-1.1
-1.2
carbon source
M9+polygalacturonate
N.D.
-0.6
-1.4
-0.5
-1.8
carbon source
M9+sucrose
N.D.
-0.1
-1.2
-1.0
-1.4
carbon source
M9+polygalacturonate
N.D.
+0.4
-2.1
-1.0
-1.0
carbon source
M9+sucrose
N.D.
-0.0
-0.8
-1.1
-1.7
carbon source
M9+glycerol
N.D.
-0.4
-0.8
-0.9
-1.0
carbon source
M9+sucrose
N.D.
+0.5
-1.0
-0.5
-1.4
carbon source
M9+glycerol
N.D.
-0.5
-0.3
-0.6
-1.1
carbon source
M9+glycerol
N.D.
-0.4
-0.9
-0.3
-0.6
carbon source
M9+glycerol
N.D.
-0.1
-1.0
-0.6
-0.4
plant
Atlantic
N.D.
-0.3
-0.4
-0.4
-0.2
plant
Norland
N.D.
-0.4
-0.8
-0.1
+0.1
plant
Norland
N.D.
+0.1
-0.8
-0.0
-0.4
carbon source
M9+glycerol
N.D.
+0.5
-0.4
-0.4
-0.7
plant
Atlantic
N.D.
-0.2
-0.7
-0.1
-0.1
plant
Atlantic
N.D.
-0.2
-0.5
+0.0
-0.3
plant
Atlantic
N.D.
-0.2
-0.3
-0.3
-0.2
plant
Norland
N.D.
-0.2
-0.2
-0.3
-0.1
control
LB
N.D.
-0.1
-0.2
-0.5
+0.1
plant
Upstate
N.D.
+0.4
-0.4
+0.1
-0.4
control
PDB
N.D.
+1.4
-0.6
-0.2
-0.7
carbon source
M9+glycerol
N.D.
-0.1
-0.4
+0.4
+0.1
plant
Upstate
N.D.
+0.4
-0.4
+0.1
-0.0
control
LB
N.D.
+0.6
-0.1
+0.0
-0.2
control
PDB
N.D.
+1.1
-0.3
-0.0
-0.2
plant
Atlantic
N.D.
+0.2
+0.5
+0.3
-0.2
control
PDB
N.D.
+1.4
-0.1
+0.0
-0.1
control
PDB
N.D.
+1.5
-0.1
+0.1
-0.3
control
PDB
N.D.
+1.2
+0.0
+0.3
-0.3
control
PDB
N.D.
+1.6
-0.3
+0.1
-0.2
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