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Protein
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Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS16695 and HGI48_RS16700 overlap by 13 nucleotides
HGI48_RS16700 and HGI48_RS16705 are separated by 26 nucleotides
HGI48_RS16705 and HGI48_RS16710 overlap by 4 nucleotides
HGI48_RS16710 and HGI48_RS16715 are separated by 62 nucleotides
HGI48_RS16695: HGI48_RS16695 - pyridoxal phosphate-dependent aminotransferase, at 3,740,124 to 3,741,281
_RS16695
HGI48_RS16700: HGI48_RS16700 - amidohydrolase, at 3,741,269 to 3,742,036
_RS16700
HGI48_RS16705: HGI48_RS16705 - allantoate amidohydrolase, at 3,742,063 to 3,743,328
_RS16705
HGI48_RS16710: HGI48_RS16710 - alanine--glyoxylate aminotransferase family protein, at 3,743,325 to 3,744,569
_RS16710
HGI48_RS16715: HGI48_RS16715 - ATP-binding cassette domain-containing protein, at 3,744,632 to 3,745,363
_RS16715
Group
Condition
HGI48
_RS16695
HGI48
_RS16700
HGI48
_RS16705
HGI48
_RS16710
HGI48
_RS16715
plant
Atlantic
-0.3
-0.0
-0.1
-0.2
-0.7
plant
Upstate
-0.1
-0.1
-0.3
-0.6
-0.0
plant
Norland
-0.2
-0.0
-0.3
-0.1
-0.2
plant
Norland
-0.2
-0.0
-0.2
-0.5
+0.1
plant
Upstate
+0.1
-0.1
-0.2
-0.2
-0.4
plant
Upstate
-0.1
+0.0
-0.2
+0.1
-0.5
plant
Atlantic
-0.1
+0.1
-0.1
-0.7
+0.1
control
LB
-0.3
+0.0
-0.1
-0.1
-0.2
plant
Norland
-0.0
-0.1
-0.0
-0.6
+0.2
carbon source
M9+glycerol
-0.1
+0.4
-0.2
-0.3
-0.3
plant
Upstate
-0.0
+0.0
+0.1
-0.4
+0.1
carbon source
M9+glycerol
-0.3
+0.3
-0.3
-0.2
+0.2
carbon source
M9+polygalacturonate
-0.4
-0.2
-0.0
+0.0
+0.4
plant
Atlantic
+0.1
-0.1
-0.3
-0.2
+0.4
carbon source
M9+polygalacturonate
-0.2
+0.0
+0.1
-0.3
+0.3
carbon source
M9+glycerol
-0.1
+0.3
-0.3
+0.0
+0.1
plant
Atlantic
+0.1
-0.0
-0.3
+0.1
+0.1
plant
Atlantic
+0.1
-0.1
-0.2
+0.1
+0.2
carbon source
M9+glycerol
-0.1
+0.4
+0.0
+0.1
-0.1
carbon source
M9+glycerol
+0.1
+0.3
+0.1
+0.2
-0.3
carbon source
M9+polygalacturonate
+0.1
+0.0
+0.2
-0.0
+0.4
carbon source
M9+sucrose
+0.0
+0.4
+0.2
+0.1
+0.2
carbon source
M9+sucrose
-0.1
+0.4
+0.1
+0.2
+0.4
control
PDB
-0.1
-0.0
+0.5
+0.6
+0.0
control
PDB
-0.1
-0.1
+0.6
+0.6
+0.1
control
PDB
-0.0
-0.0
+0.9
+0.5
-0.1
control
PDB
-0.1
-0.1
+0.8
+0.9
-0.1
control
PDB
-0.3
-0.1
+0.7
+1.1
+0.2
control
PDB
-0.1
-0.1
+0.8
+0.7
+0.3
carbon source
M9+sucrose
-0.1
+0.5
+0.4
+0.3
+0.7
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