Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS16675 and HGI48_RS16680 are separated by 84 nucleotidesHGI48_RS16680 and HGI48_RS16685 are separated by 33 nucleotidesHGI48_RS16685 and HGI48_RS16690 overlap by 4 nucleotidesHGI48_RS16690 and HGI48_RS16695 are separated by 206 nucleotides HGI48_RS16675: HGI48_RS16675 - S-methyl-5-thioribose-1-phosphate isomerase, at 3,736,922 to 3,737,953 _RS16675 HGI48_RS16680: HGI48_RS16680 - acireductone dioxygenase, at 3,738,038 to 3,738,580 _RS16680 HGI48_RS16685: HGI48_RS16685 - acireductone synthase, at 3,738,614 to 3,739,306 _RS16685 HGI48_RS16690: HGI48_RS16690 - methylthioribulose 1-phosphate dehydratase, at 3,739,303 to 3,739,917 _RS16690 HGI48_RS16695: HGI48_RS16695 - pyridoxal phosphate-dependent aminotransferase, at 3,740,124 to 3,741,281 _RS16695
Group Condition HGI48_RS16675 HGI48_RS16680 HGI48_RS16685 HGI48_RS16690 HGI48_RS16695
plant Upstate +0.0 -2.1 -0.2 -0.0 -0.1
plant Atlantic -0.2 -1.8 +0.1 -0.1 -0.1
plant Upstate -0.3 -0.9 -0.1 -0.2 -0.0
carbon source M9+polygalacturonate -0.1 -1.0 +0.0 -0.2 -0.2
plant Atlantic +0.2 -1.4 -0.0 -0.1 -0.0
carbon source M9+sucrose -0.2 -0.8 +0.2 -0.7 +0.0
carbon source M9+sucrose -0.3 -0.2 +0.1 -0.8 -0.1
carbon source M9+glycerol +0.0 -1.0 -0.1 +0.1 -0.3
plant Atlantic +0.2 -0.7 +0.6 -1.0 -0.3
plant Norland +0.1 -0.8 +0.1 -0.3 -0.2
plant Upstate -0.0 -0.8 +0.1 -0.1 -0.1
carbon source M9+sucrose -0.1 -0.8 +0.0 +0.1 -0.1
carbon source M9+glycerol +0.1 -1.3 +0.1 +0.2 +0.1
carbon source M9+glycerol +0.0 -0.8 -0.0 +0.3 -0.1
carbon source M9+glycerol -0.3 -0.3 -0.1 +0.3 -0.1
control PDB +0.1 -1.3 +0.0 +0.7 -0.0
plant Norland -0.3 -0.4 +0.2 +0.2 -0.0
plant Atlantic +0.5 -0.4 -0.6 +0.2 +0.1
control PDB -0.1 -0.3 +0.1 +0.4 -0.3
plant Norland -0.1 +0.3 +0.3 -0.3 -0.2
plant Norland +0.2 +0.2 +0.1 -0.6 +0.1
carbon source M9+polygalacturonate -0.6 +0.2 +0.2 +0.2 +0.1
plant Upstate -0.1 +0.5 -0.0 -0.3 +0.1
control LB -0.1 +0.5 +0.1 -0.0 -0.3
carbon source M9+polygalacturonate +0.1 +1.1 -0.4 -0.2 -0.4
plant Atlantic +0.1 -0.6 +0.1 +0.6 +0.1
carbon source M9+glycerol -0.3 +0.8 -0.0 +0.2 -0.1
control LB -0.0 +0.3 +0.1 +0.3 +0.0
plant Norland +0.1 +0.3 +0.1 +0.5 +0.0
carbon source M9+glycerol -0.2 +0.4 +0.2 +0.7 +0.0
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