Fitness for 5 genes in Dickeya dianthicola 67-19

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 39 experiments or choose conditions or try the comparative fitness browser

500 ntHGI48_RS16590 and HGI48_RS16595 are separated by 164 nucleotidesHGI48_RS16595 and HGI48_RS16600 are separated by 154 nucleotidesHGI48_RS16600 and HGI48_RS16605 are separated by 10 nucleotidesHGI48_RS16605 and HGI48_RS16610 are separated by 125 nucleotides HGI48_RS16590: HGI48_RS16590 - tyrosine-type recombinase/integrase, at 3,719,436 to 3,719,874 _RS16590 HGI48_RS16595: HGI48_RS16595 - tRNA-Thr, at 3,720,039 to 3,720,114 _RS16595 HGI48_RS16600: HGI48_RS16600 - glutamate-5-semialdehyde dehydrogenase, at 3,720,269 to 3,721,522 _RS16600 HGI48_RS16605: HGI48_RS16605 - glutamate 5-kinase, at 3,721,533 to 3,722,636 _RS16605 HGI48_RS16610: HGI48_RS16610 - sigma factor-binding protein Crl, at 3,722,762 to 3,723,160 _RS16610
Group Condition HGI48_RS16590 HGI48_RS16595 HGI48_RS16600 HGI48_RS16605 HGI48_RS16610
control LB -0.3 +0.1 -0.5 -1.5 +0.1
carbon source M9+glycerol -0.1 -0.2 -1.0 -1.1 +0.6
plant Upstate -0.2 -0.3 -0.4 -1.1 +0.1
carbon source M9+sucrose +0.0 +0.9 -1.3 -1.0 -0.3
control LB +0.0 -0.1 -0.5 -1.0 +0.0
control PDB -0.3 -0.4 -0.1 -0.2 -0.4
plant Upstate -0.2 -0.5 -0.1 -0.8 +0.2
plant Atlantic -0.0 -0.5 +0.0 -0.9 +0.0
control LB +0.1 -0.5 -0.4 -0.6 +0.1
carbon source M9+glycerol +0.1 -0.0 -0.7 -1.0 +0.6
plant Norland +0.1 -0.2 -0.3 -0.9 +0.4
carbon source M9+glycerol -0.1 +0.4 -1.4 -0.1 +0.4
carbon source M9+sucrose +0.2 +1.4 -1.5 -1.0 +0.2
carbon source M9+glycerol +0.1 -0.2 -0.5 -0.6 +0.5
plant Atlantic -0.2 +0.6 -0.2 -1.4 +0.6
plant Atlantic +0.2 -0.1 -0.4 -0.5 +0.2
carbon source M9+sucrose +0.3 +1.4 -1.3 -1.0 +0.1
carbon source M9+glycerol -0.2 -0.1 -0.7 +0.4 +0.2
carbon source M9+polygalacturonate +0.1 +0.6 -1.4 -0.8 +1.3
control PDB -0.1 -0.5 +0.4 +0.2 -0.3
carbon source M9+polygalacturonate +0.2 +0.3 -1.8 +0.5 +0.6
plant Norland +0.4 -0.2 +0.2 -0.5 +0.0
plant Upstate +0.5 +0.5 -0.5 -0.7 +0.1
carbon source M9+glycerol +0.2 +0.7 -0.6 -0.8 +0.4
plant Norland +0.1 -0.3 +0.2 -0.3 +0.3
plant Atlantic +0.5 -0.2 +0.4 -0.4 -0.2
plant Atlantic +0.2 +0.1 -0.2 -0.5 +0.4
plant Norland +0.1 -0.1 -0.0 -0.4 +0.7
plant Atlantic -0.6 -0.1 +0.0 +0.5 +0.3
carbon source M9+polygalacturonate +0.3 +0.8 -1.9 +0.6 +0.9
remove
HGI48_RS16590
plot
remove
HGI48_RS16595
plot
remove
HGI48_RS16600
remove
HGI48_RS16605
plot
remove
HGI48_RS16610
plot