Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS16455 and HGI48_RS16460 are separated by 87 nucleotidesHGI48_RS16460 and HGI48_RS16465 are separated by 179 nucleotidesHGI48_RS16465 and HGI48_RS16470 overlap by 7 nucleotidesHGI48_RS16470 and HGI48_RS16475 are separated by 205 nucleotides HGI48_RS16455: HGI48_RS16455 - YbdD/YjiX family protein, at 3,687,665 to 3,687,868 _RS16455 HGI48_RS16460: HGI48_RS16460 - carbon starvation protein A, at 3,687,956 to 3,690,103 _RS16460 HGI48_RS16465: HGI48_RS16465 - two-component system response regulator BtsR, at 3,690,283 to 3,691,008 _RS16465 HGI48_RS16470: HGI48_RS16470 - sensor histidine kinase, at 3,691,002 to 3,692,693 _RS16470 HGI48_RS16475: HGI48_RS16475 - GntR family transcriptional regulator, at 3,692,899 to 3,693,672 _RS16475
Group Condition HGI48_RS16455 HGI48_RS16460 HGI48_RS16465 HGI48_RS16470 HGI48_RS16475
control PDB -0.6 -0.0 -0.1 +0.0 +0.2
plant Norland -0.5 +0.1 -0.2 +0.1 +0.0
plant Atlantic +0.1 -0.3 +0.3 -0.3 -0.1
control PDB +0.0 -0.1 -0.2 +0.1 +0.2
carbon source M9+polygalacturonate -0.6 +0.0 +0.1 +0.0 +0.6
control PDB +0.1 -0.2 -0.0 -0.0 +0.4
plant Norland -0.3 -0.1 +0.3 +0.0 +0.2
plant Upstate +0.1 -0.1 -0.0 +0.1 +0.2
plant Norland -0.1 -0.1 +0.2 +0.0 +0.3
carbon source M9+polygalacturonate +0.1 -0.0 -0.2 +0.3 +0.3
carbon source M9+sucrose -0.1 +0.2 +0.2 +0.2 +0.1
control LB +0.1 -0.0 +0.2 +0.1 +0.1
plant Norland +0.3 -0.2 +0.2 -0.0 +0.3
plant Upstate +0.5 -0.0 +0.1 -0.1 +0.0
carbon source M9+glycerol -0.1 -0.1 +0.2 +0.1 +0.4
carbon source M9+sucrose +0.3 +0.1 -0.1 +0.2 +0.2
control PDB +0.1 +0.0 +0.3 +0.1 +0.2
control PDB +0.3 +0.2 +0.2 -0.2 +0.4
control PDB +0.6 -0.1 +0.1 -0.0 +0.2
control LB +0.3 +0.1 +0.3 +0.0 +0.1
plant Atlantic -0.2 +0.1 +0.4 +0.4 +0.2
plant Atlantic +0.7 -0.2 +0.0 +0.1 +0.3
plant Norland +0.2 +0.0 +0.3 +0.0 +0.4
plant Upstate +0.4 +0.2 +0.2 +0.1 +0.1
carbon source M9+glycerol +0.3 +0.1 +0.0 -0.1 +0.9
carbon source M9+glycerol +0.5 -0.0 -0.1 -0.0 +0.9
plant Atlantic +0.6 -0.2 +0.2 -0.0 +0.6
plant Atlantic +0.7 -0.1 +0.1 +0.1 +0.7
carbon source M9+glycerol +0.3 -0.1 +0.3 +0.0 +1.0
carbon source M9+glycerol +0.2 -0.0 +0.3 +0.3 +0.9
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