Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS16125 and HGI48_RS16130 are separated by 108 nucleotidesHGI48_RS16130 and HGI48_RS16135 are separated by 30 nucleotidesHGI48_RS16135 and HGI48_RS16140 are separated by 217 nucleotidesHGI48_RS16140 and HGI48_RS16145 are separated by 8 nucleotides HGI48_RS16125: HGI48_RS16125 - YacC family pilotin-like protein, at 3,621,489 to 3,621,836 _RS16125 HGI48_RS16130: HGI48_RS16130 - polyamine aminopropyltransferase, at 3,621,945 to 3,622,808 _RS16130 HGI48_RS16135: HGI48_RS16135 - adenosylmethionine decarboxylase, at 3,622,839 to 3,623,633 _RS16135 HGI48_RS16140: HGI48_RS16140 - glutaredoxin-like protein NrdH, at 3,623,851 to 3,624,084 _RS16140 HGI48_RS16145: HGI48_RS16145 - class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI, at 3,624,093 to 3,624,500 _RS16145
Group Condition HGI48_RS16125 HGI48_RS16130 HGI48_RS16135 HGI48_RS16140 HGI48_RS16145
carbon source M9+sucrose -0.8 -1.0 -0.5 -0.7 -0.2
carbon source M9+sucrose -0.7 -0.9 -0.4 -0.6 -0.3
carbon source M9+sucrose -0.8 -1.1 -0.5 +0.0 -0.1
carbon source M9+polygalacturonate -0.2 -1.0 -0.4 -0.3 +0.0
carbon source M9+polygalacturonate +0.5 -0.8 -0.6 -0.5 -0.2
carbon source M9+polygalacturonate +0.1 -1.0 -0.5 +0.2 -0.1
plant Atlantic -0.2 -0.4 -0.0 -0.0 -0.0
control LB -0.5 +0.0 -0.0 -0.0 +0.1
plant Norland -0.4 +0.1 +0.1 -0.2 +0.2
plant Upstate -0.3 +0.2 +0.0 +0.1 -0.1
plant Norland -0.5 +0.1 +0.1 +0.3 -0.1
plant Norland +0.2 -0.1 +0.1 -0.3 +0.1
control LB -0.2 +0.0 -0.0 +0.2 +0.2
control PDB -0.5 +0.4 +0.5 +0.0 -0.2
carbon source M9+glycerol -0.1 +0.2 +0.2 -0.0 +0.0
plant Upstate +0.2 -0.1 -0.2 +0.1 +0.2
carbon source M9+glycerol -0.2 +0.0 +0.2 -0.0 +0.3
plant Atlantic +0.4 +0.0 -0.3 +0.2 +0.2
plant Norland +0.4 +0.1 +0.1 +0.3 -0.4
carbon source M9+glycerol +0.3 +0.1 +0.2 +0.2 -0.2
carbon source M9+glycerol +0.3 +0.1 +0.3 +0.1 -0.0
plant Atlantic -0.2 +0.1 +0.3 +0.3 +0.3
plant Atlantic +0.4 +0.2 +0.1 -0.0 +0.2
plant Upstate +0.0 +0.2 +0.2 +0.4 +0.0
control PDB -0.2 +0.6 +0.4 +0.0 +0.2
plant Norland +0.7 +0.2 +0.2 -0.1 +0.1
control PDB -0.1 +0.5 +0.4 +0.1 +0.2
control PDB -0.1 +0.5 +0.4 +0.2 +0.3
control PDB +0.0 +0.5 +0.5 +0.0 +0.3
control PDB +0.4 +0.4 +0.5 +0.3 -0.1
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