Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS16030 and HGI48_RS16035 are separated by 104 nucleotidesHGI48_RS16035 and HGI48_RS16040 are separated by 307 nucleotidesHGI48_RS16040 and HGI48_RS16045 are separated by 12 nucleotidesHGI48_RS16045 and HGI48_RS16050 are separated by 171 nucleotides HGI48_RS16030: HGI48_RS16030 - bifunctional glycosyl transferase/transpeptidase, at 3,601,699 to 3,604,197 _RS16030 HGI48_RS16035: HGI48_RS16035 - ATP-dependent helicase HrpB, at 3,604,302 to 3,606,803 _RS16035 HGI48_RS16040: HGI48_RS16040 - RNA 2',3'-cyclic phosphodiesterase, at 3,607,111 to 3,607,644 _RS16040 HGI48_RS16045: HGI48_RS16045 - DNA/RNA nuclease SfsA, at 3,607,657 to 3,608,376 _RS16045 HGI48_RS16050: HGI48_RS16050 - RNA polymerase-binding protein DksA, at 3,608,548 to 3,609,003 _RS16050
Group Condition HGI48_RS16030 HGI48_RS16035 HGI48_RS16040 HGI48_RS16045 HGI48_RS16050
plant Atlantic -0.0 -0.1 +0.1 -0.0 -3.5
plant Atlantic -0.2 +0.6 -0.4 -0.0 -3.6
plant Upstate -0.2 +0.2 -0.1 +0.0 -3.5
plant Upstate -0.5 -0.2 +0.0 -0.1 -2.7
plant Norland -0.3 -0.4 -0.1 -0.3 -2.3
plant Atlantic -0.3 +0.2 +0.4 -0.2 -3.5
plant Norland -0.8 +0.1 -0.1 -0.3 -2.1
carbon source M9+sucrose -0.1 +0.0 -1.0 -0.2 -2.0
plant Atlantic +0.6 -0.4 +0.2 +0.0 -3.6
carbon source M9+polygalacturonate -0.6 -0.5 -0.4 -0.5 -0.9
plant Norland -0.0 +0.0 -0.1 -0.2 -2.5
plant Upstate -0.9 +0.3 -0.1 -0.2 -1.8
carbon source M9+polygalacturonate -0.7 -0.3 +0.2 -0.1 -1.8
carbon source M9+glycerol +0.4 +0.0 -0.2 +0.0 -3.0
plant Atlantic +0.3 +0.4 -0.7 -0.1 -2.4
carbon source M9+sucrose -0.0 +0.1 -0.6 -0.0 -2.0
carbon source M9+sucrose -0.1 +0.4 -0.2 -0.5 -2.1
plant Norland +0.1 -0.1 +0.0 +0.0 -2.5
plant Atlantic -0.5 -0.0 -0.2 +0.2 -1.9
plant Upstate -0.5 +0.2 +0.2 -0.2 -1.8
plant Norland -0.2 -0.0 -0.1 +0.0 -1.8
control LB -0.2 -0.1 -0.2 +0.0 -1.5
control LB -0.6 +0.3 +0.0 +0.0 -1.5
control LB -0.2 +0.0 +0.2 -0.1 -1.5
carbon source M9+glycerol +0.5 +0.1 -0.5 -0.2 -0.8
plant Norland +0.5 +0.6 +0.0 -0.3 -1.4
carbon source M9+glycerol +1.7 -0.3 +0.0 -0.1 -0.9
control PDB +0.4 +0.3 -0.4 +0.0 +0.6
control PDB -0.1 +0.4 -0.1 +0.1 +1.1
control PDB +0.9 +0.0 +0.3 -0.1 +0.8
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