Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS16000 and HGI48_RS16005 are separated by 163 nucleotidesHGI48_RS16005 and HGI48_RS16010 are separated by 210 nucleotidesHGI48_RS16010 and HGI48_RS16015 are separated by 55 nucleotidesHGI48_RS16015 and HGI48_RS16020 are separated by 89 nucleotides HGI48_RS16000: HGI48_RS16000 - serine endoprotease DegP, at 3,594,690 to 3,596,138 _RS16000 HGI48_RS16005: HGI48_RS16005 - dGTPase, at 3,596,302 to 3,597,819 _RS16005 HGI48_RS16010: HGI48_RS16010 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase, at 3,598,030 to 3,598,731 _RS16010 HGI48_RS16015: HGI48_RS16015 - vitamin B12 ABC transporter substrate-binding protein BtuF, at 3,598,787 to 3,599,617 _RS16015 HGI48_RS16020: HGI48_RS16020 - iron-sulfur cluster insertion protein ErpA, at 3,599,707 to 3,600,051 _RS16020
Group Condition HGI48_RS16000 HGI48_RS16005 HGI48_RS16010 HGI48_RS16015 HGI48_RS16020
plant Atlantic -0.3 -0.4 N.D. -0.0 N.D.
plant Norland -0.0 -0.4 N.D. -0.2 N.D.
plant Norland -0.3 -0.5 N.D. +0.1 N.D.
carbon source M9+glycerol -0.2 -0.2 N.D. -0.2 N.D.
plant Upstate -0.1 -0.3 N.D. -0.2 N.D.
plant Upstate -0.3 -0.1 N.D. -0.1 N.D.
plant Upstate -0.2 -0.4 N.D. +0.1 N.D.
plant Upstate +0.3 -0.8 N.D. +0.0 N.D.
plant Norland -0.2 -0.2 N.D. -0.0 N.D.
control PDB -0.1 -0.4 N.D. +0.2 N.D.
carbon source M9+glycerol -0.5 -0.0 N.D. +0.2 N.D.
plant Atlantic +0.1 -0.5 N.D. +0.0 N.D.
plant Atlantic -0.2 -0.3 N.D. +0.2 N.D.
carbon source M9+glycerol +0.1 -0.0 N.D. -0.2 N.D.
control PDB -0.1 -0.1 N.D. +0.1 N.D.
control PDB -0.3 +0.1 N.D. +0.1 N.D.
plant Upstate -0.1 -0.2 N.D. +0.2 N.D.
plant Norland -0.0 -0.3 N.D. +0.3 N.D.
plant Atlantic +0.2 +0.0 N.D. -0.3 N.D.
carbon source M9+glycerol +0.2 -0.1 N.D. -0.1 N.D.
control LB +0.2 -0.0 N.D. -0.2 N.D.
control PDB -0.1 -0.1 N.D. +0.3 N.D.
plant Norland +0.1 -0.2 N.D. +0.2 N.D.
plant Atlantic -0.1 -0.1 N.D. +0.3 N.D.
control LB -0.2 +0.1 N.D. +0.2 N.D.
carbon source M9+sucrose -0.0 +0.2 N.D. +0.3 N.D.
carbon source M9+polygalacturonate +0.2 +0.6 N.D. +0.0 N.D.
carbon source M9+polygalacturonate -0.1 +0.7 N.D. +0.3 N.D.
carbon source M9+polygalacturonate +0.0 +0.6 N.D. +0.4 N.D.
carbon source M9+sucrose +0.1 +0.5 N.D. +0.5 N.D.
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