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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS15885 and HGI48_RS15890 are separated by 279 nucleotides
HGI48_RS15890 and HGI48_RS15895 are separated by 125 nucleotides
HGI48_RS15895 and HGI48_RS15900 are separated by 318 nucleotides
HGI48_RS15900 and HGI48_RS15905 are separated by 45 nucleotides
HGI48_RS15885: HGI48_RS15885 - tRNA-Ala, at 3,571,276 to 3,571,351
_RS15885
HGI48_RS15890: HGI48_RS15890 - O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase, at 3,571,631 to 3,572,899
_RS15890
HGI48_RS15895: HGI48_RS15895 - glutamate--tRNA ligase, at 3,573,025 to 3,574,440
_RS15895
HGI48_RS15900: HGI48_RS15900 - tRNA-Val, at 3,574,759 to 3,574,834
_RS15900
HGI48_RS15905: HGI48_RS15905 - tRNA-Val, at 3,574,880 to 3,574,955
_RS15905
Group
Condition
HGI48
_RS15885
HGI48
_RS15890
HGI48
_RS15895
HGI48
_RS15900
HGI48
_RS15905
plant
Atlantic
N.D.
-0.2
N.D.
N.D.
N.D.
plant
Atlantic
N.D.
-0.1
N.D.
N.D.
N.D.
control
PDB
N.D.
-0.1
N.D.
N.D.
N.D.
carbon source
M9+glycerol
N.D.
-0.1
N.D.
N.D.
N.D.
plant
Norland
N.D.
-0.1
N.D.
N.D.
N.D.
plant
Upstate
N.D.
-0.1
N.D.
N.D.
N.D.
control
PDB
N.D.
-0.1
N.D.
N.D.
N.D.
plant
Norland
N.D.
-0.0
N.D.
N.D.
N.D.
plant
Atlantic
N.D.
+0.0
N.D.
N.D.
N.D.
carbon source
M9+sucrose
N.D.
+0.0
N.D.
N.D.
N.D.
plant
Norland
N.D.
+0.1
N.D.
N.D.
N.D.
control
LB
N.D.
+0.1
N.D.
N.D.
N.D.
carbon source
M9+glycerol
N.D.
+0.1
N.D.
N.D.
N.D.
control
PDB
N.D.
+0.1
N.D.
N.D.
N.D.
control
PDB
N.D.
+0.1
N.D.
N.D.
N.D.
plant
Upstate
N.D.
+0.1
N.D.
N.D.
N.D.
control
PDB
N.D.
+0.1
N.D.
N.D.
N.D.
control
LB
N.D.
+0.1
N.D.
N.D.
N.D.
carbon source
M9+sucrose
N.D.
+0.1
N.D.
N.D.
N.D.
plant
Norland
N.D.
+0.1
N.D.
N.D.
N.D.
plant
Norland
N.D.
+0.1
N.D.
N.D.
N.D.
carbon source
M9+sucrose
N.D.
+0.1
N.D.
N.D.
N.D.
plant
Atlantic
N.D.
+0.1
N.D.
N.D.
N.D.
control
PDB
N.D.
+0.1
N.D.
N.D.
N.D.
plant
Upstate
N.D.
+0.1
N.D.
N.D.
N.D.
carbon source
M9+polygalacturonate
N.D.
+0.2
N.D.
N.D.
N.D.
carbon source
M9+glycerol
N.D.
+0.2
N.D.
N.D.
N.D.
carbon source
M9+polygalacturonate
N.D.
+0.2
N.D.
N.D.
N.D.
plant
Atlantic
N.D.
+0.3
N.D.
N.D.
N.D.
plant
Atlantic
N.D.
+0.5
N.D.
N.D.
N.D.
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