Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS15845 and HGI48_RS15850 are separated by 49 nucleotidesHGI48_RS15850 and HGI48_RS15855 are separated by 358 nucleotidesHGI48_RS15855 and HGI48_RS15860 are separated by 114 nucleotidesHGI48_RS15860 and HGI48_RS15865 are separated by 134 nucleotides HGI48_RS15845: HGI48_RS15845 - anti-sigma-E factor RseA, at 3,563,687 to 3,564,352 _RS15845 HGI48_RS15850: HGI48_RS15850 - RNA polymerase sigma factor RpoE, at 3,564,402 to 3,564,977 _RS15850 HGI48_RS15855: HGI48_RS15855 - L-aspartate oxidase, at 3,565,336 to 3,566,937 _RS15855 HGI48_RS15860: HGI48_RS15860 - tRNA1(Val) (adenine(37)-N6)-methyltransferase, at 3,567,052 to 3,567,795 _RS15860 HGI48_RS15865: HGI48_RS15865 - ATP-dependent RNA helicase SrmB, at 3,567,930 to 3,569,282 _RS15865
Group Condition HGI48_RS15845 HGI48_RS15850 HGI48_RS15855 HGI48_RS15860 HGI48_RS15865
carbon source M9+sucrose N.D. -0.8 -1.7 -0.6 -0.4
carbon source M9+sucrose N.D. -0.7 -1.5 -0.0 -0.5
control PDB N.D. -1.5 -0.1 -0.4 -0.5
control PDB N.D. -1.2 -0.3 -0.4 -0.5
control PDB N.D. -1.6 -0.1 -0.1 -0.5
carbon source M9+sucrose N.D. -0.4 -1.7 +0.2 -0.4
control PDB N.D. -1.3 -0.0 -0.3 -0.4
plant Atlantic N.D. -0.3 -0.2 -0.3 -1.0
plant Atlantic N.D. +0.5 -0.4 -0.5 -1.1
control PDB N.D. -1.1 -0.2 +0.5 -0.6
control PDB N.D. -0.9 -0.1 +0.3 -0.5
carbon source M9+polygalacturonate N.D. -0.1 -1.1 +0.1 -0.0
plant Atlantic N.D. +0.2 -0.3 -0.5 -0.5
plant Norland N.D. -0.3 -0.1 +0.0 -0.8
carbon source M9+polygalacturonate N.D. +0.1 -1.0 -0.4 +0.3
plant Upstate N.D. +0.1 -0.3 +0.2 -0.9
plant Norland N.D. +0.1 -0.0 +0.1 -1.0
carbon source M9+glycerol N.D. +0.0 -0.9 -0.1 +0.3
carbon source M9+polygalacturonate N.D. -0.0 -1.0 +0.3 +0.0
plant Upstate N.D. -0.1 +0.2 +0.1 -0.9
plant Atlantic N.D. -0.4 -0.1 +0.3 -0.4
plant Norland N.D. -0.1 +0.1 +0.3 -0.9
plant Upstate N.D. +0.1 -0.0 +0.2 -0.7
plant Atlantic N.D. +0.2 +0.2 +0.2 -0.8
control LB N.D. +0.0 +0.2 +0.3 -0.5
plant Norland N.D. +0.7 +0.2 -0.1 -0.5
carbon source M9+glycerol N.D. +0.4 -0.5 -0.1 +0.5
carbon source M9+glycerol N.D. +0.7 -1.0 +0.2 +0.6
carbon source M9+glycerol N.D. +0.2 -0.3 +0.5 +0.1
carbon source M9+glycerol N.D. +0.5 -0.4 +0.2 +0.5
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