Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS15725 and HGI48_RS15730 are separated by 84 nucleotidesHGI48_RS15730 and HGI48_RS15735 are separated by 102 nucleotidesHGI48_RS15735 and HGI48_RS15740 overlap by 4 nucleotidesHGI48_RS15740 and HGI48_RS15745 are separated by 2 nucleotides HGI48_RS15725: HGI48_RS15725 - pectinesterase A, at 3,534,564 to 3,535,661 _RS15725 HGI48_RS15730: HGI48_RS15730 - nitrogen regulatory protein P-II, at 3,535,746 to 3,536,084 _RS15730 HGI48_RS15735: HGI48_RS15735 - two-component system response regulator GlrR, at 3,536,187 to 3,537,524 _RS15735 HGI48_RS15740: HGI48_RS15740 - two-component system QseEF-associated lipoprotein QseG, at 3,537,521 to 3,538,306 _RS15740 HGI48_RS15745: HGI48_RS15745 - HAMP domain-containing histidine kinase, at 3,538,309 to 3,539,742 _RS15745
Group Condition HGI48_RS15725 HGI48_RS15730 HGI48_RS15735 HGI48_RS15740 HGI48_RS15745
plant Atlantic -0.3 -0.6 +0.0 +0.3 +0.0
control PDB -0.1 -1.2 +0.2 +0.3 +0.3
control LB -0.1 -0.1 +0.1 +0.2 +0.1
carbon source M9+sucrose +0.2 -0.8 +0.2 +0.3 +0.3
control LB -0.2 -0.2 +0.3 +0.2 +0.1
control PDB +0.1 -0.8 +0.4 +0.3 +0.2
carbon source M9+polygalacturonate -0.0 -0.3 +0.3 +0.0 +0.3
carbon source M9+polygalacturonate +0.2 -0.4 +0.1 +0.1 +0.4
plant Atlantic -0.1 +0.6 -0.2 +0.2 -0.1
control PDB +0.3 -1.0 +0.5 +0.4 +0.3
plant Upstate -0.2 +0.4 -0.0 +0.2 +0.0
plant Upstate +0.1 +0.3 +0.1 +0.2 -0.1
carbon source M9+polygalacturonate +0.2 -0.7 +0.3 +0.0 +0.7
carbon source M9+sucrose +0.1 -0.5 +0.2 +0.3 +0.3
control PDB -0.0 -1.0 +0.5 +0.7 +0.4
control PDB +0.1 -0.7 +0.2 +0.5 +0.4
control PDB +0.1 -0.7 +0.5 +0.4 +0.2
plant Atlantic +0.1 +0.8 -0.3 +0.2 -0.0
plant Norland +0.0 +0.7 +0.0 +0.1 -0.1
carbon source M9+sucrose +0.2 -0.4 +0.2 +0.3 +0.4
plant Norland +0.2 +0.3 +0.0 +0.3 +0.1
carbon source M9+glycerol -0.0 +1.2 -0.3 -0.1 +0.0
plant Atlantic +0.5 -0.1 +0.2 +0.1 +0.2
plant Norland +0.1 +0.5 +0.1 +0.2 +0.0
carbon source M9+glycerol +0.2 +0.8 -0.1 +0.2 -0.1
carbon source M9+glycerol +0.3 +0.5 -0.1 +0.2 +0.3
plant Atlantic +0.1 +0.9 -0.0 +0.3 +0.2
carbon source M9+glycerol +0.1 +1.3 +0.2 +0.1 +0.0
carbon source M9+glycerol +0.0 +1.3 +0.0 +0.3 +0.2
carbon source M9+glycerol +0.4 +1.3 +0.2 +0.1 +0.1
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