Fitness for 5 genes in Dickeya dianthicola 67-19

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 39 experiments or choose conditions or try the comparative fitness browser

500 ntHGI48_RS15545 and HGI48_RS15550 overlap by 20 nucleotidesHGI48_RS15550 and HGI48_RS15555 are separated by 126 nucleotidesHGI48_RS15555 and HGI48_RS15560 are separated by 140 nucleotidesHGI48_RS15560 and HGI48_RS15565 are separated by 10 nucleotides HGI48_RS15545: HGI48_RS15545 - M4 family metallopeptidase, at 3,495,687 to 3,496,736 _RS15545 HGI48_RS15550: HGI48_RS15550 - hypothetical protein, at 3,496,717 to 3,497,085 _RS15550 HGI48_RS15555: HGI48_RS15555 - ribosome biogenesis GTPase Der, at 3,497,212 to 3,498,699 _RS15555 HGI48_RS15560: HGI48_RS15560 - outer membrane protein assembly factor BamB, at 3,498,840 to 3,500,021 _RS15560 HGI48_RS15565: HGI48_RS15565 - YfgM family protein, at 3,500,032 to 3,500,652 _RS15565
Group Condition HGI48_RS15545 HGI48_RS15550 HGI48_RS15555 HGI48_RS15560 HGI48_RS15565
carbon source M9+polygalacturonate -2.3 N.D. N.D. -0.5 -0.1
carbon source M9+polygalacturonate -2.5 N.D. N.D. +0.2 -0.1
carbon source M9+polygalacturonate -1.8 N.D. N.D. +0.2 +0.1
control LB -0.2 N.D. N.D. -1.2 +0.1
plant Atlantic +0.2 N.D. N.D. -2.2 +0.8
plant Atlantic -0.2 N.D. N.D. -1.0 +0.3
control PDB +0.3 N.D. N.D. -1.4 +0.3
control PDB +0.4 N.D. N.D. -0.9 -0.1
control LB -0.2 N.D. N.D. -0.7 +0.2
plant Atlantic +0.3 N.D. N.D. -0.5 -0.2
plant Upstate -0.1 N.D. N.D. -0.6 +0.3
plant Upstate -0.1 N.D. N.D. -1.1 +0.9
plant Norland -0.0 N.D. N.D. -0.7 +0.5
plant Norland -0.0 N.D. N.D. -0.9 +0.7
carbon source M9+glycerol -0.7 N.D. N.D. +0.3 +0.3
plant Upstate +0.1 N.D. N.D. -0.6 +0.3
plant Norland +0.2 N.D. N.D. -0.7 +0.5
plant Upstate +0.2 N.D. N.D. -0.6 +0.5
plant Norland +0.1 N.D. N.D. -0.9 +0.9
carbon source M9+glycerol -0.3 N.D. N.D. -0.2 +0.7
plant Norland +0.4 N.D. N.D. -1.0 +0.9
plant Upstate -0.2 N.D. N.D. -0.2 +0.9
plant Atlantic +0.1 N.D. N.D. -0.4 +0.8
plant Norland +0.2 N.D. N.D. -0.9 +1.2
control PDB +0.6 N.D. N.D. -0.4 +0.5
carbon source M9+glycerol -0.2 N.D. N.D. +0.4 +0.6
carbon source M9+glycerol -0.2 N.D. N.D. -0.1 +1.2
carbon source M9+glycerol -0.1 N.D. N.D. -0.1 +1.3
carbon source M9+glycerol -0.1 N.D. N.D. +0.4 +0.8
carbon source M9+sucrose +0.5 N.D. N.D. +1.7 +0.4
remove
HGI48_RS15545
plot		 remove
HGI48_RS15550
plot		 remove
HGI48_RS15555		 remove
HGI48_RS15560
plot		 remove
HGI48_RS15565
plot