Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 39 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
HGI48_RS15460 and HGI48_RS15465 are separated by 20 nucleotides
HGI48_RS15465 and HGI48_RS15470 are separated by 31 nucleotides
HGI48_RS15470 and HGI48_RS15475 overlap by 4 nucleotides
HGI48_RS15475 and HGI48_RS15480 overlap by 4 nucleotides
HGI48_RS15460: HGI48_RS15460 - type II secretion system F family protein, at 3,478,944 to 3,480,149
_RS15460
HGI48_RS15465: HGI48_RS15465 - type II secretion system major pseudopilin GspG, at 3,480,170 to 3,480,589
_RS15465
HGI48_RS15470: HGI48_RS15470 - type II secretion system minor pseudopilin GspI, at 3,480,621 to 3,480,989
_RS15470
HGI48_RS15475: HGI48_RS15475 - prepilin-type N-terminal cleavage/methylation domain-containing protein, at 3,480,986 to 3,481,531
_RS15475
HGI48_RS15480: HGI48_RS15480 - general secretion pathway protein GspK, at 3,481,528 to 3,482,448
_RS15480
Group
Condition
HGI48
_RS15460
HGI48
_RS15465
HGI48
_RS15470
HGI48
_RS15475
HGI48
_RS15480
plant
Atlantic
-0.1
-0.2
-0.3
-0.2
-0.6
plant
Atlantic
-0.4
+0.1
-0.2
-0.5
-0.2
plant
Atlantic
+0.1
+0.1
-1.1
-0.0
-0.2
carbon source
M9+glycerol
-0.2
+0.1
-0.9
+0.1
-0.2
plant
Upstate
+0.2
-0.1
-0.7
-0.1
-0.2
control
LB
-0.3
+0.1
-1.1
+0.3
+0.1
plant
Upstate
-0.0
-0.1
-1.1
+0.1
+0.2
carbon source
M9+glycerol
+0.2
-0.1
-1.0
-0.2
+0.1
plant
Upstate
-0.0
-0.1
-0.6
-0.1
+0.1
plant
Norland
-0.0
+0.0
-0.8
-0.2
+0.1
control
LB
-0.1
-0.1
-0.6
-0.2
+0.2
carbon source
M9+glycerol
-0.2
-0.2
-0.4
+0.0
+0.1
control
PDB
-0.0
-0.1
-0.8
+0.4
-0.1
carbon source
M9+glycerol
-0.1
-0.3
-0.4
+0.2
-0.1
control
PDB
-0.0
+0.2
-0.7
+0.1
-0.0
plant
Norland
+0.1
-0.2
-0.5
+0.2
+0.2
plant
Norland
-0.1
-0.2
-0.3
+0.0
+0.4
plant
Norland
+0.2
+0.3
-0.4
-0.2
+0.0
control
PDB
+0.2
+0.1
-0.5
+0.3
-0.1
plant
Atlantic
-0.4
+0.1
+0.1
-0.1
+0.2
control
LB
+0.1
+0.1
-0.5
+0.4
+0.1
plant
Upstate
-0.2
-0.0
+0.5
+0.2
-0.2
plant
Norland
+0.4
+0.0
+0.3
+0.0
-0.2
plant
Atlantic
+0.2
+0.2
+0.6
-0.2
-0.1
carbon source
M9+polygalacturonate
-0.2
+0.1
+0.6
+0.1
+0.4
carbon source
M9+polygalacturonate
-0.4
+0.0
+1.0
+0.4
-0.0
carbon source
M9+polygalacturonate
+0.0
+0.2
+1.0
+0.3
-0.1
carbon source
M9+sucrose
+0.3
+0.2
+1.0
+0.0
-0.0
carbon source
M9+sucrose
+0.2
+0.0
+1.4
-0.0
-0.1
carbon source
M9+sucrose
+0.0
+0.4
+1.1
+0.2
-0.0
remove
HGI48_RS15460
plot
remove
HGI48_RS15465
plot
remove
HGI48_RS15470
remove
HGI48_RS15475
plot
remove
HGI48_RS15480
plot