Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS15440 and HGI48_RS15445 are separated by 554 nucleotidesHGI48_RS15445 and HGI48_RS15450 are separated by 15 nucleotidesHGI48_RS15450 and HGI48_RS15455 overlap by 1 nucleotidesHGI48_RS15455 and HGI48_RS15460 overlap by 8 nucleotides HGI48_RS15440: HGI48_RS15440 - VOC family protein, at 3,473,914 to 3,474,327 _RS15440 HGI48_RS15445: HGI48_RS15445 - hypothetical protein, at 3,474,882 to 3,475,370 _RS15445 HGI48_RS15450: HGI48_RS15450 - type II secretion system secretin GspD, at 3,475,386 to 3,477,473 _RS15450 HGI48_RS15455: HGI48_RS15455 - Flp pilus assembly complex ATPase component TadA, at 3,477,473 to 3,478,951 _RS15455 HGI48_RS15460: HGI48_RS15460 - type II secretion system F family protein, at 3,478,944 to 3,480,149 _RS15460
Group Condition HGI48_RS15440 HGI48_RS15445 HGI48_RS15450 HGI48_RS15455 HGI48_RS15460
plant Upstate +0.6 -2.0 -0.2 -0.1 -0.0
carbon source M9+polygalacturonate -0.2 -0.2 -0.1 -0.3 -0.4
plant Atlantic -0.4 -0.8 +0.1 +0.2 -0.1
control PDB +0.5 -1.0 -0.2 -0.1 -0.0
carbon source M9+polygalacturonate -0.3 -0.5 +0.1 +0.1 +0.0
control PDB -0.0 -0.8 +0.1 +0.2 -0.0
plant Atlantic -0.1 -0.1 -0.2 -0.3 +0.2
plant Atlantic -0.4 +0.6 -0.2 +0.0 -0.4
carbon source M9+sucrose -0.3 -0.2 +0.1 -0.1 +0.2
carbon source M9+polygalacturonate +0.3 -0.5 +0.2 -0.1 -0.2
carbon source M9+glycerol +0.5 -0.7 +0.1 +0.1 -0.2
carbon source M9+sucrose +0.3 -0.6 -0.0 +0.1 +0.3
control PDB +0.6 -0.6 -0.2 +0.2 +0.1
plant Norland +0.4 -0.4 -0.1 +0.1 +0.2
carbon source M9+glycerol -0.2 +0.4 -0.1 +0.1 -0.1
plant Upstate +0.1 -0.2 -0.1 +0.2 +0.1
carbon source M9+glycerol +0.3 +0.2 -0.1 -0.3 +0.2
control PDB +0.4 +0.3 -0.2 -0.1 +0.1
control PDB +0.6 +0.1 -0.3 +0.2 +0.0
plant Upstate +0.2 +0.6 +0.0 +0.1 -0.2
control LB +0.5 +0.4 -0.1 +0.0 -0.1
plant Norland +0.2 +0.5 -0.0 -0.0 +0.1
plant Norland +0.3 +0.4 -0.0 +0.0 +0.1
carbon source M9+glycerol +0.3 +0.5 -0.1 +0.1 +0.0
control PDB +0.7 +0.1 -0.1 -0.0 +0.2
control LB +0.2 +0.7 -0.0 -0.0 +0.1
plant Atlantic +0.3 +0.7 +0.0 -0.1 +0.1
plant Norland +0.6 +0.1 +0.0 -0.1 +0.4
plant Upstate +0.2 +0.8 +0.0 -0.1 +0.2
plant Atlantic +0.0 +1.4 +0.1 +0.1 -0.4
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