Fitness for 5 genes in Dickeya dianthicola 67-19

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 39 experiments or choose conditions or try the comparative fitness browser

500 ntHGI48_RS15130 and HGI48_RS15135 overlap by 1 nucleotidesHGI48_RS15135 and HGI48_RS15140 are separated by 231 nucleotidesHGI48_RS15140 and HGI48_RS15145 overlap by 4 nucleotidesHGI48_RS15145 and HGI48_RS15150 are separated by 11 nucleotides HGI48_RS15130: HGI48_RS15130 - HutD family protein, at 3,405,596 to 3,406,165 _RS15130 HGI48_RS15135: HGI48_RS15135 - formimidoylglutamate deiminase, at 3,406,165 to 3,407,529 _RS15135 HGI48_RS15140: HGI48_RS15140 - imidazolonepropionase, at 3,407,761 to 3,408,975 _RS15140 HGI48_RS15145: HGI48_RS15145 - N-formylglutamate deformylase, at 3,408,972 to 3,409,772 _RS15145 HGI48_RS15150: HGI48_RS15150 - nitrate- and nitrite sensing domain-containing protein, at 3,409,784 to 3,411,730 _RS15150
Group Condition HGI48_RS15130 HGI48_RS15135 HGI48_RS15140 HGI48_RS15145 HGI48_RS15150
plant Norland -0.1 -0.0 -0.5 -0.4 -0.0
plant Atlantic -0.3 -0.2 -0.7 +0.3 -0.0
plant Upstate -0.3 -0.3 -0.3 +0.0 +0.0
plant Norland -0.4 -0.0 -0.1 -0.3 -0.1
control LB +0.0 -0.1 -0.2 -0.4 -0.1
plant Upstate -0.5 -0.1 +0.3 -0.1 -0.1
carbon source M9+glycerol -0.3 -0.3 +0.0 -0.0 +0.0
control PDB -0.5 +0.2 +0.1 -0.3 -0.0
carbon source M9+glycerol -0.3 -0.2 +0.3 -0.1 -0.1
plant Norland -0.3 -0.1 -0.0 -0.2 +0.2
carbon source M9+glycerol -0.2 +0.2 -0.3 -0.3 +0.2
control LB -0.2 +0.0 -0.1 -0.2 +0.2
carbon source M9+polygalacturonate -0.5 +0.2 -0.2 +0.2 +0.0
control LB -0.1 -0.3 +0.2 -0.2 +0.1
plant Upstate -0.3 +0.0 +0.2 +0.0 -0.1
control PDB -0.6 +0.5 +0.0 +0.0 +0.0
carbon source M9+glycerol -0.4 -0.0 +0.5 +0.1 -0.1
carbon source M9+polygalacturonate +0.1 -0.2 +0.2 +0.1 -0.1
plant Atlantic -0.3 -0.1 +0.3 -0.0 +0.2
plant Norland -0.1 +0.3 +0.1 -0.2 +0.0
carbon source M9+sucrose +0.2 -0.0 -0.2 +0.2 -0.0
carbon source M9+glycerol -0.3 +0.2 +0.2 +0.3 -0.1
plant Atlantic -0.3 +0.5 -0.1 +0.0 +0.1
plant Upstate -0.2 +0.4 -0.1 +0.1 +0.1
plant Atlantic +0.3 +0.6 -0.2 -0.5 +0.1
carbon source M9+glycerol -0.3 +0.3 +0.1 +0.2 +0.2
carbon source M9+polygalacturonate -0.3 +0.1 +0.3 +0.5 +0.1
control PDB -0.1 -0.2 +0.7 +0.2 +0.1
control PDB +0.2 +0.3 +0.2 -0.0 +0.0
carbon source M9+sucrose +0.1 +0.1 +0.4 -0.0 +0.1
remove
HGI48_RS15130
plot
remove
HGI48_RS15135
plot
remove
HGI48_RS15140
remove
HGI48_RS15145
plot
remove
HGI48_RS15150
plot