Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS14740 and HGI48_RS14745 are separated by 1147 nucleotidesHGI48_RS14745 and HGI48_RS14750 are separated by 33 nucleotidesHGI48_RS14750 and HGI48_RS14755 are separated by 155 nucleotidesHGI48_RS14755 and HGI48_RS14760 are separated by 415 nucleotides HGI48_RS14740: HGI48_RS14740 - type II secretion system protein GspC, at 3,317,237 to 3,318,055 _RS14740 HGI48_RS14745: HGI48_RS14745 - type II secretion system assembly factor GspB, at 3,319,203 to 3,319,820 _RS14745 HGI48_RS14750: HGI48_RS14750 - GspS family T2SS pilot lipoprotein variant OutS, at 3,319,854 to 3,320,255 _RS14750 HGI48_RS14755: HGI48_RS14755 - alanine transaminase, at 3,320,411 to 3,321,652 _RS14755 HGI48_RS14760: HGI48_RS14760 - D-amino-acid transaminase, at 3,322,068 to 3,322,928 _RS14760
Group Condition HGI48_RS14740 HGI48_RS14745 HGI48_RS14750 HGI48_RS14755 HGI48_RS14760
plant Atlantic -0.1 -0.1 -0.9 -0.2 -0.1
plant Atlantic -0.1 -0.1 -0.4 -0.1 -0.4
control PDB -0.3 -0.1 -0.5 -0.1 -0.1
plant Atlantic -0.1 -0.4 +0.1 -0.0 -0.5
plant Atlantic -0.3 -0.2 -0.2 +0.1 -0.3
carbon source M9+sucrose -0.4 -0.4 +0.0 -0.0 +0.0
plant Atlantic -0.3 -0.3 +0.1 -0.1 -0.1
carbon source M9+polygalacturonate -0.0 -0.6 -0.2 +0.1 +0.0
carbon source M9+glycerol -0.3 -0.5 +0.2 -0.1 -0.0
carbon source M9+sucrose -0.0 -0.3 -0.3 -0.0 -0.0
plant Norland -0.3 -0.0 -0.1 -0.3 +0.0
carbon source M9+glycerol +0.2 -0.2 -0.2 -0.6 +0.2
control PDB -0.0 +0.1 -0.3 -0.4 -0.1
plant Norland -0.3 -0.3 +0.4 +0.0 -0.4
plant Norland +0.1 -0.2 +0.0 -0.3 -0.1
carbon source M9+glycerol -0.5 -0.1 +0.3 -0.4 +0.3
carbon source M9+glycerol -0.4 +0.0 -0.1 -0.0 +0.2
control PDB -0.3 +0.5 -0.2 -0.2 -0.1
plant Upstate -0.3 -0.3 +0.1 +0.2 +0.0
carbon source M9+glycerol -0.3 +0.1 +0.2 -0.1 -0.2
control LB -0.2 +0.0 +0.2 -0.2 -0.0
plant Norland -0.0 +0.1 -0.1 +0.2 -0.3
control LB -0.2 -0.3 +0.2 +0.2 -0.0
carbon source M9+polygalacturonate -0.1 -0.1 +0.1 +0.3 -0.1
plant Atlantic -0.1 -0.3 +0.4 +0.1 -0.2
plant Upstate +0.0 -0.1 +0.2 -0.3 +0.2
control LB -0.2 +0.1 +0.3 -0.1 -0.1
carbon source M9+polygalacturonate -0.4 -0.4 +0.5 +0.3 +0.3
plant Upstate -0.2 +0.2 +0.3 -0.1 +0.1
plant Norland +0.1 +0.4 +0.1 +0.0 -0.0
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