Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS14465 and HGI48_RS14470 are separated by 15 nucleotidesHGI48_RS14470 and HGI48_RS14475 are separated by 301 nucleotidesHGI48_RS14475 and HGI48_RS14480 are separated by 124 nucleotidesHGI48_RS14480 and HGI48_RS14485 are separated by 158 nucleotides HGI48_RS14465: HGI48_RS14465 - tripartite tricarboxylate transporter TctB family protein, at 3,247,327 to 3,247,755 _RS14465 HGI48_RS14470: HGI48_RS14470 - tripartite tricarboxylate transporter permease, at 3,247,771 to 3,249,285 _RS14470 HGI48_RS14475: HGI48_RS14475 - flagella biosynthesis regulator Flk, at 3,249,587 to 3,250,843 _RS14475 HGI48_RS14480: HGI48_RS14480 - beta-ketoacyl-ACP synthase I, at 3,250,968 to 3,252,188 _RS14480 HGI48_RS14485: HGI48_RS14485 - bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC, at 3,252,347 to 3,254,365 _RS14485
Group Condition HGI48_RS14465 HGI48_RS14470 HGI48_RS14475 HGI48_RS14480 HGI48_RS14485
plant Atlantic -1.5 -0.6 -0.2 N.D. +0.1
plant Upstate -0.8 -0.2 -0.2 N.D. -0.3
carbon source M9+glycerol -0.6 -0.1 -0.3 N.D. -0.1
plant Norland -0.4 -0.2 -0.1 N.D. -0.3
control PDB -1.0 -0.1 +0.2 N.D. -0.0
control LB -0.4 -0.2 -0.2 N.D. -0.0
plant Upstate -0.4 +0.3 -0.2 N.D. -0.5
carbon source M9+sucrose -0.3 -0.2 -0.2 N.D. +0.1
plant Norland -0.1 -0.3 +0.1 N.D. -0.3
carbon source M9+glycerol -0.5 -0.0 +0.1 N.D. -0.0
carbon source M9+polygalacturonate -0.6 +0.0 -0.0 N.D. +0.1
control PDB -0.3 -0.1 -0.3 N.D. +0.3
carbon source M9+glycerol -0.4 -0.1 -0.0 N.D. +0.2
carbon source M9+glycerol +0.0 -0.1 -0.4 N.D. +0.2
control PDB +0.1 -0.1 -0.5 N.D. +0.2
control LB -0.1 -0.1 -0.2 N.D. +0.3
plant Norland -0.5 +0.0 +0.3 N.D. -0.0
carbon source M9+sucrose -0.4 +0.0 -0.1 N.D. +0.3
plant Atlantic -0.8 +0.1 +0.3 N.D. +0.2
carbon source M9+glycerol +0.2 -0.0 -0.2 N.D. -0.2
control PDB +0.2 -0.2 -0.2 N.D. +0.1
plant Norland +0.0 -0.3 +0.3 N.D. -0.0
carbon source M9+polygalacturonate -0.3 -0.0 +0.0 N.D. +0.2
control PDB -0.1 -0.3 +0.3 N.D. +0.1
plant Atlantic +0.3 -0.5 -0.0 N.D. +0.5
plant Norland +0.2 +0.0 +0.2 N.D. -0.1
carbon source M9+polygalacturonate -0.1 +0.1 -0.2 N.D. +0.7
plant Atlantic +0.1 -0.0 +0.3 N.D. +0.2
carbon source M9+sucrose +0.2 +0.1 +0.2 N.D. +0.1
plant Atlantic +0.2 +0.0 +0.3 N.D. +0.4
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