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Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS14285 and HGI48_RS14290 are separated by 114 nucleotides
HGI48_RS14290 and HGI48_RS14295 overlap by 4 nucleotides
HGI48_RS14295 and HGI48_RS14300 are separated by 2 nucleotides
HGI48_RS14300 and HGI48_RS14305 are separated by 118 nucleotides
HGI48_RS14285: HGI48_RS14285 - NADH-quinone oxidoreductase subunit NuoG, at 3,206,668 to 3,209,394
_RS14285
HGI48_RS14290: HGI48_RS14290 - NADH-quinone oxidoreductase subunit NuoF, at 3,209,509 to 3,210,858
_RS14290
HGI48_RS14295: HGI48_RS14295 - NADH-quinone oxidoreductase subunit NuoE, at 3,210,855 to 3,211,385
_RS14295
HGI48_RS14300: HGI48_RS14300 - NADH-quinone oxidoreductase subunit C/D, at 3,211,388 to 3,213,187
_RS14300
HGI48_RS14305: HGI48_RS14305 - NADH-quinone oxidoreductase subunit B, at 3,213,306 to 3,213,980
_RS14305
Group
Condition
HGI48
_RS14285
HGI48
_RS14290
HGI48
_RS14295
HGI48
_RS14300
HGI48
_RS14305
carbon source
M9+polygalacturonate
-2.5
N.D.
N.D.
-2.3
-4.0
carbon source
M9+polygalacturonate
+0.3
N.D.
N.D.
-1.6
-4.8
carbon source
M9+glycerol
-1.4
N.D.
N.D.
-1.2
-3.1
carbon source
M9+glycerol
-1.6
N.D.
N.D.
-1.6
-2.4
plant
Upstate
-1.9
N.D.
N.D.
-0.2
-3.4
plant
Atlantic
-1.7
N.D.
N.D.
-2.2
-1.4
plant
Norland
-1.3
N.D.
N.D.
-2.1
-1.9
plant
Norland
-0.2
N.D.
N.D.
-1.3
-3.6
plant
Atlantic
-2.1
N.D.
N.D.
-1.0
-1.6
plant
Atlantic
-3.3
N.D.
N.D.
-0.6
-0.8
plant
Upstate
-1.8
N.D.
N.D.
-1.4
-1.3
plant
Upstate
-0.5
N.D.
N.D.
-2.0
-1.8
plant
Norland
-1.1
N.D.
N.D.
-1.5
-1.6
carbon source
M9+sucrose
-1.0
N.D.
N.D.
-0.4
-2.4
plant
Upstate
-1.7
N.D.
N.D.
-1.0
-1.0
plant
Norland
-0.6
N.D.
N.D.
-0.5
-2.4
carbon source
M9+polygalacturonate
-1.0
N.D.
N.D.
+0.1
-2.7
carbon source
M9+sucrose
-1.9
N.D.
N.D.
+0.1
-1.6
carbon source
M9+sucrose
-0.3
N.D.
N.D.
+0.0
-3.1
control
LB
-1.0
N.D.
N.D.
-1.1
-1.2
plant
Atlantic
-1.1
N.D.
N.D.
-1.4
-0.7
plant
Norland
-0.6
N.D.
N.D.
-0.7
-1.8
control
LB
-0.5
N.D.
N.D.
-2.0
-0.4
carbon source
M9+glycerol
-1.0
N.D.
N.D.
-0.6
-1.3
plant
Norland
+0.8
N.D.
N.D.
-0.9
-1.4
plant
Atlantic
+0.5
N.D.
N.D.
-0.6
+2.3
control
PDB
+1.4
N.D.
N.D.
-0.5
+1.3
control
PDB
+0.9
N.D.
N.D.
+0.7
+1.2
control
PDB
+1.5
N.D.
N.D.
+0.2
+1.3
control
PDB
+1.8
N.D.
N.D.
+0.2
+1.8
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