Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS14115 and HGI48_RS14120 overlap by 1 nucleotidesHGI48_RS14120 and HGI48_RS14125 are separated by 2 nucleotidesHGI48_RS14125 and HGI48_RS14130 are separated by 143 nucleotidesHGI48_RS14130 and HGI48_RS14135 are separated by 241 nucleotides HGI48_RS14115: HGI48_RS14115 - efflux transporter outer membrane subunit, at 3,162,545 to 3,163,942 _RS14115 HGI48_RS14120: HGI48_RS14120 - efflux RND transporter permease subunit, at 3,163,942 to 3,167,109 _RS14120 HGI48_RS14125: HGI48_RS14125 - efflux RND transporter periplasmic adaptor subunit, at 3,167,112 to 3,168,257 _RS14125 HGI48_RS14130: HGI48_RS14130 - TetR/AcrR family transcriptional regulator, at 3,168,401 to 3,168,997 _RS14130 HGI48_RS14135: HGI48_RS14135 - alpha/beta hydrolase, at 3,169,239 to 3,170,222 _RS14135
Group Condition HGI48_RS14115 HGI48_RS14120 HGI48_RS14125 HGI48_RS14130 HGI48_RS14135
carbon source M9+glycerol -0.4 -0.0 -0.3 N.D. -0.2
plant Upstate -0.5 -0.1 -0.0 N.D. -0.1
control PDB -0.3 +0.1 -0.4 N.D. -0.0
plant Norland -0.2 -0.1 -0.2 N.D. +0.0
plant Atlantic +0.3 -0.3 -0.3 N.D. -0.2
plant Upstate -0.6 -0.1 +0.1 N.D. +0.1
plant Norland -0.2 -0.0 -0.2 N.D. -0.0
plant Norland -0.3 +0.1 -0.1 N.D. -0.2
control LB -0.2 -0.1 -0.1 N.D. -0.1
carbon source M9+glycerol +0.0 -0.1 -0.2 N.D. -0.1
control LB -0.2 -0.2 -0.0 N.D. +0.1
plant Upstate -0.2 +0.1 +0.0 N.D. -0.2
carbon source M9+glycerol -0.2 +0.0 +0.1 N.D. -0.1
control PDB -0.3 +0.1 +0.1 N.D. -0.1
plant Norland -0.3 +0.0 +0.1 N.D. +0.0
control LB -0.1 +0.1 -0.1 N.D. -0.0
plant Atlantic -0.2 +0.1 -0.1 N.D. +0.2
carbon source M9+glycerol -0.0 -0.1 +0.2 N.D. -0.2
plant Atlantic +0.5 -0.4 +0.0 N.D. +0.0
carbon source M9+glycerol -0.0 +0.2 +0.2 N.D. -0.1
plant Atlantic +0.2 +0.1 -0.2 N.D. +0.3
plant Atlantic +0.1 +0.1 -0.0 N.D. +0.3
plant Upstate -0.1 +0.3 +0.2 N.D. +0.1
carbon source M9+polygalacturonate +0.5 +0.2 +0.0 N.D. -0.3
plant Atlantic +0.4 +0.1 -0.1 N.D. +0.1
carbon source M9+polygalacturonate +0.8 +0.1 -0.4 N.D. +0.1
carbon source M9+sucrose +0.5 +0.3 -0.2 N.D. +0.1
carbon source M9+polygalacturonate +0.8 +0.1 +0.1 N.D. -0.0
carbon source M9+sucrose +0.4 +0.3 -0.0 N.D. +0.2
carbon source M9+sucrose +0.6 +0.4 -0.0 N.D. -0.1
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