Fitness for 5 genes in Dickeya dianthicola 67-19

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 39 experiments or choose conditions or try the comparative fitness browser

500 ntHGI48_RS14000 and HGI48_RS14005 are separated by 56 nucleotidesHGI48_RS14005 and HGI48_RS14010 are separated by 74 nucleotidesHGI48_RS14010 and HGI48_RS14015 are separated by 138 nucleotidesHGI48_RS14015 and HGI48_RS14020 are separated by 733 nucleotides HGI48_RS14000: HGI48_RS14000 - NADP-dependent oxidoreductase, at 3,131,591 to 3,132,610 _RS14000 HGI48_RS14005: HGI48_RS14005 - SDR family oxidoreductase, at 3,132,667 to 3,133,449 _RS14005 HGI48_RS14010: HGI48_RS14010 - alkene reductase, at 3,133,524 to 3,134,615 _RS14010 HGI48_RS14015: HGI48_RS14015 - TetR/AcrR family transcriptional regulator, at 3,134,754 to 3,135,314 _RS14015 HGI48_RS14020: HGI48_RS14020 - glycosyltransferase, at 3,136,048 to 3,137,325 _RS14020
Group Condition HGI48_RS14000 HGI48_RS14005 HGI48_RS14010 HGI48_RS14015 HGI48_RS14020
carbon source M9+polygalacturonate -0.5 -0.2 -0.1 -0.3 -0.2
carbon source M9+polygalacturonate -0.7 -0.0 +0.0 -0.1 -0.1
plant Atlantic +0.0 -0.3 -0.0 -0.4 +0.3
carbon source M9+polygalacturonate -0.3 -0.2 +0.2 -0.0 -0.0
control LB +0.2 -0.1 -0.2 -0.2 -0.0
plant Atlantic +0.1 -0.3 -0.1 -0.0 +0.1
control PDB +0.2 -0.0 +0.0 -0.4 -0.1
plant Atlantic +0.2 -0.2 -0.3 -0.2 +0.3
carbon source M9+glycerol +0.1 -0.3 -0.0 -0.1 +0.2
plant Norland +0.2 -0.4 -0.2 -0.1 +0.4
control PDB +0.1 +0.2 -0.1 +0.0 -0.3
plant Norland +0.4 -0.2 -0.3 -0.1 +0.2
control LB +0.3 -0.2 -0.0 -0.1 +0.1
plant Atlantic +0.5 -0.1 -0.2 -0.3 +0.1
carbon source M9+sucrose +0.3 +0.2 -0.2 -0.1 -0.1
plant Upstate +0.1 -0.2 -0.1 +0.1 +0.3
control LB +0.1 +0.1 -0.1 -0.2 +0.3
control PDB +0.0 +0.2 +0.1 -0.2 +0.1
plant Norland +0.1 +0.1 +0.1 -0.4 +0.4
carbon source M9+sucrose -0.2 +0.0 +0.1 +0.1 +0.3
control PDB +0.1 +0.1 +0.1 -0.3 +0.3
plant Upstate +0.2 -0.1 -0.1 +0.0 +0.3
plant Upstate +0.2 +0.1 -0.1 -0.1 +0.2
plant Norland +0.2 -0.2 +0.1 -0.1 +0.4
plant Norland +0.4 +0.0 -0.1 -0.3 +0.3
plant Atlantic +0.2 +0.1 -0.0 -0.1 +0.4
plant Norland +0.2 -0.1 -0.0 +0.1 +0.4
plant Upstate +0.3 -0.1 -0.0 +0.0 +0.4
carbon source M9+glycerol +0.3 -0.1 +0.1 +0.1 +0.2
carbon source M9+glycerol +0.5 -0.0 +0.1 +0.1 +0.3
remove
HGI48_RS14000
plot
remove
HGI48_RS14005
plot
remove
HGI48_RS14010
remove
HGI48_RS14015
plot
remove
HGI48_RS14020
plot