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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS13970 and HGI48_RS13975 are separated by 617 nucleotides
HGI48_RS13975 and HGI48_RS13980 overlap by 4 nucleotides
HGI48_RS13980 and HGI48_RS13985 overlap by 8 nucleotides
HGI48_RS13985 and HGI48_RS13990 are separated by 36 nucleotides
HGI48_RS13970: HGI48_RS13970 - DUF1738 domain-containing protein, at 3,123,167 to 3,123,943
_RS13970
HGI48_RS13975: HGI48_RS13975 - DNA cytosine methyltransferase, at 3,124,561 to 3,125,706
_RS13975
HGI48_RS13980: HGI48_RS13980 - ATP-binding protein, at 3,125,703 to 3,128,672
_RS13980
HGI48_RS13985: HGI48_RS13985 - hypothetical protein, at 3,128,665 to 3,130,557
_RS13985
HGI48_RS13990: HGI48_RS13990 - DNA mismatch endonuclease Vsr, at 3,130,594 to 3,131,031
_RS13990
Group
Condition
HGI48
_RS13970
HGI48
_RS13975
HGI48
_RS13980
HGI48
_RS13985
HGI48
_RS13990
plant
Upstate
-0.1
-1.1
+0.1
-0.0
+0.1
plant
Atlantic
-0.1
-1.1
-0.0
-0.1
+0.2
carbon source
M9+sucrose
-0.1
-1.0
+0.1
+0.1
-0.1
control
PDB
+0.0
-0.3
-0.3
-0.0
-0.3
plant
Atlantic
-0.0
-1.0
-0.0
+0.1
-0.0
control
PDB
-0.1
-0.4
-0.2
-0.0
-0.2
carbon source
M9+glycerol
+0.1
-0.7
-0.0
+0.0
-0.2
carbon source
M9+glycerol
-0.1
-0.6
+0.1
-0.1
+0.0
plant
Norland
-0.1
-0.9
+0.1
+0.0
+0.2
plant
Norland
+0.0
-0.8
+0.0
-0.0
+0.1
plant
Upstate
+0.1
-0.9
-0.0
+0.0
+0.1
plant
Norland
+0.0
-0.9
+0.1
+0.1
-0.0
plant
Upstate
-0.1
-0.8
+0.2
+0.2
-0.1
plant
Atlantic
-0.1
-0.8
+0.1
+0.2
-0.0
carbon source
M9+sucrose
-0.1
-0.6
+0.1
-0.0
-0.1
plant
Atlantic
-0.1
-0.5
-0.1
+0.1
+0.1
plant
Norland
+0.2
-1.2
+0.1
+0.3
+0.0
control
PDB
+0.1
-0.4
-0.2
-0.0
-0.0
plant
Atlantic
+0.0
-0.8
+0.1
+0.1
+0.1
carbon source
M9+sucrose
+0.1
-0.9
+0.2
-0.0
+0.1
plant
Upstate
+0.0
-0.9
+0.2
+0.1
+0.2
plant
Atlantic
+0.0
-1.0
+0.1
+0.1
+0.4
plant
Upstate
+0.1
-0.7
+0.1
+0.2
+0.0
carbon source
M9+polygalacturonate
+0.2
-0.4
+0.1
-0.1
-0.1
control
PDB
+0.3
-0.2
-0.1
-0.2
-0.0
plant
Norland
+0.3
-0.7
-0.1
+0.1
+0.1
carbon source
M9+glycerol
+0.1
-0.4
+0.1
+0.1
-0.1
carbon source
M9+glycerol
+0.1
-0.1
-0.1
+0.3
-0.2
control
LB
+0.1
-0.5
-0.0
+0.1
+0.2
plant
Norland
-0.0
-0.4
+0.2
+0.0
+0.3
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