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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS13750 and HGI48_RS13755 are separated by 1017 nucleotides
HGI48_RS13755 and HGI48_RS13760 are separated by 61 nucleotides
HGI48_RS13760 and HGI48_RS13765 are separated by 31 nucleotides
HGI48_RS13765 and HGI48_RS13770 are separated by 4 nucleotides
HGI48_RS13750: HGI48_RS13750 - FkbM family methyltransferase, at 3,054,636 to 3,066,218
_RS13750
HGI48_RS13755: HGI48_RS13755 - acyl carrier protein, at 3,067,236 to 3,067,487
_RS13755
HGI48_RS13760: HGI48_RS13760 - poly(3-hydroxyalkanoate) depolymerase, at 3,067,549 to 3,068,805
_RS13760
HGI48_RS13765: HGI48_RS13765 - hydroxymethylglutaryl-CoA synthase family protein, at 3,068,837 to 3,070,099
_RS13765
HGI48_RS13770: HGI48_RS13770 - enoyl-CoA hydratase/isomerase, at 3,070,104 to 3,070,880
_RS13770
Group
Condition
HGI48
_RS13750
HGI48
_RS13755
HGI48
_RS13760
HGI48
_RS13765
HGI48
_RS13770
plant
Atlantic
-0.0
-0.9
-0.2
-0.0
-0.2
control
PDB
+0.0
-0.9
-0.1
-0.1
-0.2
carbon source
M9+glycerol
-0.0
-0.9
-0.2
-0.3
+0.2
control
PDB
-0.1
-0.4
-0.2
-0.4
+0.1
carbon source
M9+sucrose
+0.2
-0.7
-0.1
-0.1
-0.2
control
PDB
-0.0
-0.6
-0.0
-0.1
-0.0
plant
Atlantic
-0.1
-0.4
+0.1
-0.3
-0.1
carbon source
M9+glycerol
+0.0
-0.2
-0.2
-0.3
-0.0
plant
Norland
+0.1
-0.7
-0.0
+0.1
-0.1
plant
Upstate
+0.0
-0.4
-0.1
-0.3
+0.1
plant
Atlantic
+0.0
-0.7
-0.2
+0.0
+0.3
plant
Upstate
-0.0
-0.5
-0.0
-0.1
+0.1
carbon source
M9+glycerol
+0.1
-0.3
-0.0
-0.4
+0.1
control
LB
-0.0
-0.4
-0.1
-0.0
-0.0
plant
Norland
-0.0
-0.2
-0.1
-0.1
+0.0
plant
Atlantic
-0.0
-0.4
+0.0
-0.1
+0.1
carbon source
M9+polygalacturonate
+0.1
-0.6
-0.1
+0.2
-0.1
carbon source
M9+polygalacturonate
+0.1
-0.3
+0.1
-0.0
-0.2
control
PDB
-0.0
-0.4
+0.2
-0.1
-0.0
carbon source
M9+sucrose
+0.2
-0.2
+0.2
+0.1
-0.3
plant
Norland
-0.1
+0.1
-0.1
-0.1
+0.2
plant
Upstate
+0.1
-0.1
-0.0
+0.1
+0.2
control
PDB
+0.0
+0.3
-0.1
-0.0
+0.1
carbon source
M9+glycerol
+0.0
+0.2
-0.1
+0.0
+0.1
control
LB
-0.0
+0.2
+0.1
-0.1
+0.2
plant
Upstate
+0.1
+0.3
+0.1
+0.1
-0.1
plant
Atlantic
-0.0
+0.2
+0.2
-0.1
+0.2
carbon source
M9+glycerol
+0.0
+0.5
-0.0
+0.1
+0.0
carbon source
M9+glycerol
-0.0
+0.7
+0.1
-0.2
+0.1
carbon source
M9+sucrose
+0.2
+0.6
-0.0
+0.0
-0.0
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