Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS13110 and HGI48_RS13115 are separated by 35 nucleotidesHGI48_RS13115 and HGI48_RS13120 are separated by 40 nucleotidesHGI48_RS13120 and HGI48_RS13125 overlap by 23 nucleotidesHGI48_RS13125 and HGI48_RS13130 are separated by 21 nucleotides HGI48_RS13110: HGI48_RS13110 - alpha/beta hydrolase, at 2,873,852 to 2,874,394 _RS13110 HGI48_RS13115: HGI48_RS13115 - beta-N-acetylhexosaminidase, at 2,874,430 to 2,875,455 _RS13115 HGI48_RS13120: HGI48_RS13120 - phosphotransferase, at 2,875,496 to 2,876,350 _RS13120 HGI48_RS13125: HGI48_RS13125 - penicillin-binding protein activator LpoB, at 2,876,328 to 2,876,921 _RS13125 HGI48_RS13130: HGI48_RS13130 - DUF1425 domain-containing protein, at 2,876,943 to 2,877,326 _RS13130
Group Condition HGI48_RS13110 HGI48_RS13115 HGI48_RS13120 HGI48_RS13125 HGI48_RS13130
plant Upstate -0.1 -0.9 -0.5 N.D. -0.3
plant Norland -0.7 -0.2 -0.9 N.D. +0.3
control PDB -0.7 -0.1 -0.4 N.D. -0.3
plant Atlantic -0.1 +0.2 -1.4 N.D. -0.2
carbon source M9+glycerol -0.5 -0.0 -0.6 N.D. -0.1
carbon source M9+glycerol -0.5 +0.2 -1.1 N.D. +0.1
plant Atlantic -0.9 +0.4 -0.4 N.D. -0.4
plant Atlantic -0.1 +0.8 -1.0 N.D. -0.8
control PDB -0.1 -0.5 -0.3 N.D. -0.2
carbon source M9+polygalacturonate -0.1 -0.5 -0.2 N.D. -0.2
carbon source M9+glycerol -0.2 -0.4 -0.6 N.D. +0.2
control PDB -1.0 -0.0 -0.1 N.D. +0.3
plant Atlantic +0.2 -0.7 -0.3 N.D. -0.0
plant Norland +0.1 -0.3 -0.1 N.D. -0.4
plant Norland -0.1 +0.2 -0.3 N.D. -0.4
carbon source M9+glycerol -0.1 -0.5 -0.4 N.D. +0.4
carbon source M9+glycerol -0.2 -0.1 -0.5 N.D. +0.2
control LB -0.6 +0.2 -0.1 N.D. +0.0
plant Atlantic -0.2 -0.4 +0.2 N.D. +0.0
plant Norland -0.2 -0.2 -0.2 N.D. +0.3
control LB -0.1 +0.3 -0.5 N.D. +0.3
carbon source M9+glycerol -0.2 +0.5 -0.5 N.D. +0.4
carbon source M9+sucrose +0.4 -0.4 +0.5 N.D. +0.2
plant Upstate +0.4 -0.1 -0.1 N.D. +0.5
control PDB -0.0 +0.4 +0.3 N.D. +0.2
carbon source M9+sucrose +0.1 +0.3 +0.3 N.D. +0.2
plant Atlantic -0.1 +0.4 +0.6 N.D. +0.1
carbon source M9+polygalacturonate +0.4 +0.4 +0.7 N.D. +0.1
carbon source M9+polygalacturonate +0.4 +0.8 +0.7 N.D. -0.2
carbon source M9+sucrose +0.6 +0.4 +0.8 N.D. +0.2
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