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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS12955 and HGI48_RS12960 are separated by 695 nucleotides
HGI48_RS12960 and HGI48_RS12965 are separated by 177 nucleotides
HGI48_RS12965 and HGI48_RS12970 are separated by 301 nucleotides
HGI48_RS12970 and HGI48_RS12975 are separated by 532 nucleotides
HGI48_RS12955: HGI48_RS12955 - aminopeptidase N, at 2,831,691 to 2,834,306
_RS12955
HGI48_RS12960: HGI48_RS12960 - nicotinate phosphoribosyltransferase, at 2,835,002 to 2,836,207
_RS12960
HGI48_RS12965: HGI48_RS12965 - asparagine--tRNA ligase, at 2,836,385 to 2,837,785
_RS12965
HGI48_RS12970: HGI48_RS12970 - porin, at 2,838,087 to 2,839,187
_RS12970
HGI48_RS12975: HGI48_RS12975 - porin, at 2,839,720 to 2,840,823
_RS12975
Group
Condition
HGI48
_RS12955
HGI48
_RS12960
HGI48
_RS12965
HGI48
_RS12970
HGI48
_RS12975
control
PDB
-0.4
-1.8
N.D.
-0.6
-0.2
carbon source
M9+glycerol
-0.1
-0.8
N.D.
-1.5
-0.1
control
LB
-0.1
-1.2
N.D.
-1.0
-0.1
plant
Atlantic
-0.1
-1.1
N.D.
-0.9
-0.2
control
LB
-0.1
-1.4
N.D.
-0.6
-0.2
carbon source
M9+polygalacturonate
-0.6
+0.4
N.D.
-1.4
-0.4
control
PDB
-0.2
-0.9
N.D.
-0.6
-0.2
carbon source
M9+glycerol
+0.1
-0.1
N.D.
-1.4
-0.3
carbon source
M9+polygalacturonate
-0.8
+0.1
N.D.
-1.1
+0.1
control
PDB
-0.2
-0.8
N.D.
-0.3
-0.3
plant
Atlantic
-0.3
-0.4
N.D.
-0.9
+0.0
control
PDB
-0.1
-0.8
N.D.
-0.5
-0.2
plant
Atlantic
-0.3
-0.3
N.D.
-0.8
-0.1
control
LB
-0.1
-0.5
N.D.
-0.9
-0.0
plant
Upstate
+0.1
-0.6
N.D.
-0.9
-0.0
carbon source
M9+sucrose
-0.5
-0.7
N.D.
-0.2
+0.0
plant
Atlantic
-0.2
-0.6
N.D.
-0.6
-0.0
plant
Norland
-0.2
-0.9
N.D.
-0.2
+0.0
control
PDB
-0.4
-0.2
N.D.
-0.5
-0.2
control
LB
-0.0
-0.3
N.D.
-0.9
-0.1
carbon source
M9+glycerol
+0.1
+0.1
N.D.
-1.4
-0.1
plant
Norland
+0.0
-0.9
N.D.
-0.4
+0.2
plant
Upstate
-0.1
-0.5
N.D.
-0.4
-0.0
carbon source
M9+glycerol
+0.1
-0.0
N.D.
-1.1
-0.0
plant
Norland
+0.0
-0.6
N.D.
-0.4
-0.0
carbon source
M9+sucrose
-0.4
-0.6
N.D.
-0.3
+0.4
plant
Atlantic
-0.1
-0.3
N.D.
-0.5
+0.1
carbon source
M9+glycerol
+0.1
+0.4
N.D.
-1.1
-0.0
carbon source
M9+polygalacturonate
-0.4
+0.7
N.D.
-0.8
+0.0
carbon source
M9+sucrose
-0.2
-0.2
N.D.
-0.1
+0.3
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