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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS12645 and HGI48_RS12650 are separated by 570 nucleotides
HGI48_RS12650 and HGI48_RS12655 are separated by 173 nucleotides
HGI48_RS12655 and HGI48_RS12660 are separated by 262 nucleotides
HGI48_RS12660 and HGI48_RS12665 are separated by 130 nucleotides
HGI48_RS12645: HGI48_RS12645 - glycine zipper 2TM domain-containing protein, at 2,765,723 to 2,766,190
_RS12645
HGI48_RS12650: HGI48_RS12650 - transcriptional regulator SlyA, at 2,766,761 to 2,767,198
_RS12650
HGI48_RS12655: HGI48_RS12655 - DUF1289 domain-containing protein, at 2,767,372 to 2,767,611
_RS12655
HGI48_RS12660: HGI48_RS12660 - lactoylglutathione lyase, at 2,767,874 to 2,768,281
_RS12660
HGI48_RS12665: HGI48_RS12665 - ribonuclease T, at 2,768,412 to 2,769,107
_RS12665
Group
Condition
HGI48
_RS12645
HGI48
_RS12650
HGI48
_RS12655
HGI48
_RS12660
HGI48
_RS12665
plant
Atlantic
N.D.
+0.3
N.D.
-1.0
N.D.
carbon source
M9+polygalacturonate
N.D.
+1.4
N.D.
-1.6
N.D.
plant
Upstate
N.D.
+0.8
N.D.
-0.8
N.D.
plant
Upstate
N.D.
+0.8
N.D.
-0.6
N.D.
carbon source
M9+polygalacturonate
N.D.
+1.5
N.D.
-1.3
N.D.
plant
Norland
N.D.
+1.2
N.D.
-0.8
N.D.
carbon source
M9+polygalacturonate
N.D.
+1.6
N.D.
-1.2
N.D.
carbon source
M9+glycerol
N.D.
+2.6
N.D.
-2.1
N.D.
plant
Norland
N.D.
+1.0
N.D.
-0.4
N.D.
plant
Atlantic
N.D.
+1.0
N.D.
-0.4
N.D.
plant
Norland
N.D.
+1.5
N.D.
-0.9
N.D.
carbon source
M9+sucrose
N.D.
+1.5
N.D.
-0.8
N.D.
carbon source
M9+sucrose
N.D.
+1.8
N.D.
-1.0
N.D.
plant
Atlantic
N.D.
+1.7
N.D.
-0.6
N.D.
plant
Upstate
N.D.
+1.3
N.D.
-0.2
N.D.
carbon source
M9+glycerol
N.D.
+1.2
N.D.
+0.1
N.D.
plant
Norland
N.D.
+1.8
N.D.
-0.5
N.D.
plant
Atlantic
N.D.
+2.4
N.D.
-0.7
N.D.
plant
Atlantic
N.D.
+2.2
N.D.
-0.3
N.D.
carbon source
M9+sucrose
N.D.
+2.0
N.D.
-0.1
N.D.
carbon source
M9+glycerol
N.D.
+2.9
N.D.
-1.0
N.D.
carbon source
M9+glycerol
N.D.
+2.6
N.D.
-0.5
N.D.
control
PDB
N.D.
+1.2
N.D.
+1.1
N.D.
control
PDB
N.D.
+1.4
N.D.
+1.0
N.D.
control
PDB
N.D.
+1.2
N.D.
+1.1
N.D.
control
PDB
N.D.
+1.2
N.D.
+1.3
N.D.
control
PDB
N.D.
+1.3
N.D.
+1.2
N.D.
carbon source
M9+glycerol
N.D.
+3.1
N.D.
-0.5
N.D.
carbon source
M9+glycerol
N.D.
+3.3
N.D.
-0.5
N.D.
control
PDB
N.D.
+1.2
N.D.
+1.6
N.D.
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