Fitness for 5 genes in Dickeya dianthicola 67-19

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 39 experiments or choose conditions or try the comparative fitness browser

500 ntHGI48_RS12585 and HGI48_RS12590 are separated by 11 nucleotidesHGI48_RS12590 and HGI48_RS12595 are separated by 242 nucleotidesHGI48_RS12595 and HGI48_RS12600 are separated by 255 nucleotidesHGI48_RS12600 and HGI48_RS12605 are separated by 40 nucleotides HGI48_RS12585: HGI48_RS12585 - lipopolysaccharide assembly protein LapB, at 2,751,272 to 2,752,441 _RS12585 HGI48_RS12590: HGI48_RS12590 - LapA family protein, at 2,752,453 to 2,752,761 _RS12590 HGI48_RS12595: HGI48_RS12595 - phosphatidylglycerophosphatase B, at 2,753,004 to 2,753,846 _RS12595 HGI48_RS12600: HGI48_RS12600 - GTP cyclohydrolase II, at 2,754,102 to 2,754,695 _RS12600 HGI48_RS12605: HGI48_RS12605 - oligopeptide ABC transporter substrate-binding protein OppA, at 2,754,736 to 2,756,355 _RS12605
Group Condition HGI48_RS12585 HGI48_RS12590 HGI48_RS12595 HGI48_RS12600 HGI48_RS12605
control PDB N.D. -0.8 -0.7 N.D. -0.3
control PDB N.D. -0.7 -0.0 N.D. -0.6
control PDB N.D. -0.9 -0.1 N.D. -0.3
plant Atlantic N.D. -0.7 -0.1 N.D. +0.0
plant Atlantic N.D. -0.4 -0.3 N.D. -0.1
carbon source M9+glycerol N.D. -0.6 -0.1 N.D. -0.1
plant Atlantic N.D. -0.3 -0.5 N.D. +0.1
plant Norland N.D. -0.6 -0.2 N.D. +0.1
control LB N.D. -0.3 -0.3 N.D. -0.1
plant Norland N.D. -0.2 -0.2 N.D. +0.0
plant Atlantic N.D. -0.6 -0.2 N.D. +0.3
control PDB N.D. +0.0 -0.1 N.D. -0.3
carbon source M9+sucrose N.D. -0.7 +0.2 N.D. +0.1
carbon source M9+sucrose N.D. -0.6 +0.2 N.D. +0.0
plant Norland N.D. -0.4 +0.2 N.D. -0.0
carbon source M9+glycerol N.D. -0.1 -0.3 N.D. +0.1
plant Upstate N.D. -0.6 +0.3 N.D. +0.0
plant Atlantic N.D. -0.3 -0.2 N.D. +0.2
carbon source M9+sucrose N.D. -0.6 +0.2 N.D. +0.1
carbon source M9+polygalacturonate N.D. -0.5 +0.3 N.D. +0.0
plant Upstate N.D. +0.1 -0.2 N.D. +0.1
control PDB N.D. +0.2 +0.0 N.D. -0.2
control LB N.D. +0.5 -0.5 N.D. +0.0
control LB N.D. -0.2 +0.2 N.D. -0.0
carbon source M9+glycerol N.D. -0.2 +0.2 N.D. +0.1
plant Upstate N.D. -0.3 +0.3 N.D. +0.2
plant Norland N.D. -0.1 +0.2 N.D. +0.1
carbon source M9+glycerol N.D. +0.4 +0.0 N.D. +0.0
carbon source M9+polygalacturonate N.D. -0.2 +0.6 N.D. +0.1
carbon source M9+polygalacturonate N.D. +0.3 +0.4 N.D. -0.0
remove
HGI48_RS12585
plot		 remove
HGI48_RS12590
plot		 remove
HGI48_RS12595		 remove
HGI48_RS12600
plot		 remove
HGI48_RS12605
plot