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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS12390 and HGI48_RS12395 are separated by 110 nucleotides
HGI48_RS12395 and HGI48_RS12400 are separated by 539 nucleotides
HGI48_RS12400 and HGI48_RS12405 are separated by 190 nucleotides
HGI48_RS12405 and HGI48_RS12410 are separated by 155 nucleotides
HGI48_RS12390: HGI48_RS12390 - HAMP domain-containing protein, at 2,707,074 to 2,709,038
_RS12390
HGI48_RS12395: HGI48_RS12395 - hypothetical protein, at 2,709,149 to 2,709,646
_RS12395
HGI48_RS12400: HGI48_RS12400 - hypothetical protein, at 2,710,186 to 2,710,455
_RS12400
HGI48_RS12405: HGI48_RS12405 - hypothetical protein, at 2,710,646 to 2,712,139
_RS12405
HGI48_RS12410: HGI48_RS12410 - tRNA 2-thiocytidine(32) synthetase TtcA, at 2,712,295 to 2,713,236
_RS12410
Group
Condition
HGI48
_RS12390
HGI48
_RS12395
HGI48
_RS12400
HGI48
_RS12405
HGI48
_RS12410
carbon source
M9+glycerol
+0.0
+0.1
N.D.
-0.2
-0.8
plant
Norland
+0.2
-0.1
N.D.
+0.0
-0.9
control
LB
-0.0
-0.0
N.D.
+0.1
-0.6
plant
Atlantic
+0.1
-0.3
N.D.
+0.0
-0.3
plant
Upstate
-0.1
+0.1
N.D.
+0.0
-0.6
plant
Norland
-0.3
+0.2
N.D.
+0.3
-0.7
carbon source
M9+glycerol
+0.0
+0.2
N.D.
+0.1
-0.6
plant
Atlantic
-0.1
+0.2
N.D.
+0.1
-0.6
plant
Atlantic
+0.5
-0.0
N.D.
+0.2
-1.1
carbon source
M9+polygalacturonate
-0.0
+0.2
N.D.
-0.1
-0.4
control
LB
+0.2
+0.2
N.D.
-0.0
-0.6
plant
Norland
+0.1
+0.1
N.D.
+0.0
-0.4
carbon source
M9+glycerol
-0.1
+0.2
N.D.
+0.0
-0.3
plant
Norland
+0.0
+0.2
N.D.
+0.1
-0.5
carbon source
M9+polygalacturonate
-0.0
+0.4
N.D.
-0.2
-0.4
control
PDB
+0.2
+0.4
N.D.
-0.2
-0.5
carbon source
M9+glycerol
+0.1
+0.2
N.D.
+0.1
-0.4
control
PDB
+0.1
+0.3
N.D.
-0.2
-0.2
carbon source
M9+sucrose
-0.0
+0.5
N.D.
-0.4
+0.0
carbon source
M9+glycerol
+0.3
+0.1
N.D.
+0.1
-0.4
plant
Atlantic
+0.5
+0.2
N.D.
+0.0
-0.7
carbon source
M9+sucrose
-0.1
+0.5
N.D.
-0.2
-0.0
control
LB
+0.2
+0.1
N.D.
+0.1
-0.3
plant
Upstate
-0.0
+0.3
N.D.
+0.2
-0.3
carbon source
M9+polygalacturonate
-0.1
+0.4
N.D.
-0.4
+0.3
plant
Atlantic
+0.2
+0.3
N.D.
+0.1
-0.3
carbon source
M9+sucrose
-0.1
+0.6
N.D.
-0.1
-0.0
plant
Atlantic
+0.2
+0.2
N.D.
+0.2
-0.1
control
PDB
+0.2
+0.4
N.D.
-0.1
-0.0
plant
Upstate
+0.2
+0.2
N.D.
+0.2
+0.0
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