Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS12070 and HGI48_RS12075 are separated by 37 nucleotidesHGI48_RS12075 and HGI48_RS12080 are separated by 109 nucleotidesHGI48_RS12080 and HGI48_RS12085 are separated by 99 nucleotidesHGI48_RS12085 and HGI48_RS12090 are separated by 116 nucleotides HGI48_RS12070: HGI48_RS12070 - membrane integrity lipid transport subunit YebS, at 2,635,778 to 2,637,016 _RS12070 HGI48_RS12075: HGI48_RS12075 - MCE family protein, at 2,637,054 to 2,639,684 _RS12075 HGI48_RS12080: HGI48_RS12080 - 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF, at 2,639,794 to 2,641,242 _RS12080 HGI48_RS12085: HGI48_RS12085 - YebW family protein, at 2,641,342 to 2,641,533 _RS12085 HGI48_RS12090: HGI48_RS12090 - HAMP domain-containing protein, at 2,641,650 to 2,643,647 _RS12090
Group Condition HGI48_RS12070 HGI48_RS12075 HGI48_RS12080 HGI48_RS12085 HGI48_RS12090
carbon source M9+polygalacturonate -0.3 +0.2 -0.1 -0.4 -0.1
carbon source M9+polygalacturonate -0.1 +0.2 +0.3 -0.3 -0.0
plant Atlantic +0.0 -0.3 -0.3 +0.3 +0.2
plant Atlantic -0.2 -0.3 -0.0 +0.6 -0.1
control LB -0.0 -0.1 -0.2 +0.2 +0.2
plant Norland +0.0 +0.1 -0.3 +0.3 +0.0
plant Norland +0.2 -0.1 -0.1 +0.1 +0.2
control PDB +0.2 +0.1 -0.2 -0.0 +0.2
control PDB +0.3 -0.1 -0.1 +0.2 -0.0
plant Upstate +0.1 +0.0 -0.0 -0.2 +0.3
plant Upstate -0.1 -0.1 +0.3 +0.0 +0.1
plant Norland -0.1 +0.0 +0.2 +0.0 +0.2
carbon source M9+polygalacturonate +0.1 +0.3 -0.1 -0.1 +0.1
plant Norland -0.1 -0.1 +0.1 +0.3 +0.2
plant Atlantic +0.1 +0.2 -0.2 +0.2 +0.1
control PDB +0.1 +0.2 +0.1 +0.2 -0.1
plant Upstate -0.1 +0.1 +0.1 +0.3 +0.2
plant Norland -0.0 -0.1 +0.1 +0.3 +0.1
plant Upstate +0.1 +0.0 -0.1 +0.3 +0.2
plant Atlantic -0.0 -0.1 +0.3 -0.0 +0.4
carbon source M9+glycerol -0.1 +0.1 +0.1 +0.3 +0.2
carbon source M9+glycerol +0.0 +0.1 -0.1 +0.4 +0.2
control PDB +0.3 -0.1 -0.1 +0.4 +0.1
carbon source M9+glycerol +0.1 -0.1 +0.1 +0.4 +0.1
carbon source M9+sucrose -0.0 +0.4 +0.4 -0.1 +0.1
control LB -0.1 +0.1 +0.3 +0.2 +0.2
carbon source M9+glycerol +0.2 +0.1 -0.2 +0.2 +0.4
carbon source M9+sucrose -0.0 +0.3 +0.5 +0.1 +0.0
carbon source M9+sucrose +0.1 +0.2 +0.6 -0.1 +0.2
carbon source M9+glycerol +0.1 +0.2 +0.0 +0.3 +0.6
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