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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS11995 and HGI48_RS12000 are separated by 71 nucleotides
HGI48_RS12000 and HGI48_RS12005 overlap by 1 nucleotides
HGI48_RS12005 and HGI48_RS12010 overlap by 4 nucleotides
HGI48_RS12010 and HGI48_RS12015 overlap by 4 nucleotides
HGI48_RS11995: HGI48_RS11995 - NUDIX domain-containing protein, at 2,614,989 to 2,615,549
_RS11995
HGI48_RS12000: HGI48_RS12000 - respiratory nitrate reductase subunit gamma, at 2,615,621 to 2,616,298
_RS12000
HGI48_RS12005: HGI48_RS12005 - nitrate reductase molybdenum cofactor assembly chaperone, at 2,616,298 to 2,617,017
_RS12005
HGI48_RS12010: HGI48_RS12010 - nitrate reductase subunit beta, at 2,617,014 to 2,618,576
_RS12010
HGI48_RS12015: HGI48_RS12015 - nitrate reductase subunit alpha, at 2,618,573 to 2,622,346
_RS12015
Group
Condition
HGI48
_RS11995
HGI48
_RS12000
HGI48
_RS12005
HGI48
_RS12010
HGI48
_RS12015
plant
Atlantic
-0.4
-0.1
-0.9
-0.3
-0.1
plant
Atlantic
-0.5
+0.1
-1.1
-0.1
+0.2
carbon source
M9+glycerol
-0.4
-0.2
-0.6
-0.1
+0.0
plant
Atlantic
+0.2
-0.8
-0.4
-0.1
-0.1
carbon source
M9+glycerol
-0.2
-0.4
-0.5
-0.1
+0.0
plant
Upstate
+0.0
-1.2
+0.3
-0.1
+0.1
carbon source
M9+sucrose
+0.2
-0.7
-0.5
+0.1
+0.0
plant
Atlantic
-0.1
-0.2
-0.4
+0.1
-0.0
plant
Norland
+0.1
-0.5
-0.1
+0.0
-0.1
carbon source
M9+glycerol
-0.2
-0.4
+0.0
-0.0
+0.1
carbon source
M9+polygalacturonate
-0.3
+0.3
-0.4
-0.1
-0.0
plant
Atlantic
-0.0
-0.6
-0.1
-0.0
+0.2
control
LB
-0.0
-0.3
-0.2
+0.1
+0.1
plant
Norland
+0.1
-0.3
-0.3
+0.1
+0.1
control
LB
+0.2
-0.4
+0.0
-0.1
+0.0
plant
Norland
-0.0
-0.4
+0.2
-0.0
-0.0
control
LB
-0.0
-0.4
+0.1
+0.2
-0.1
carbon source
M9+sucrose
+0.3
+0.1
-0.3
-0.0
-0.1
control
PDB
+0.1
-0.2
-0.2
+0.1
+0.3
plant
Norland
-0.0
-0.4
+0.4
-0.0
+0.2
control
PDB
-0.2
-0.2
+0.3
+0.2
+0.1
carbon source
M9+glycerol
+0.3
-0.3
+0.5
-0.1
+0.1
plant
Upstate
+0.1
-0.2
+0.7
-0.0
-0.1
control
PDB
+0.1
-0.5
+0.6
+0.1
+0.2
carbon source
M9+glycerol
+0.2
-0.2
+0.3
+0.1
+0.1
carbon source
M9+polygalacturonate
+0.1
+0.6
-0.4
+0.1
+0.2
carbon source
M9+sucrose
+0.2
+0.3
-0.3
+0.3
+0.0
plant
Norland
-0.0
+0.1
+0.7
-0.1
+0.1
control
PDB
+0.1
-0.1
+0.8
+0.1
+0.2
carbon source
M9+polygalacturonate
+0.4
+0.4
+0.2
+0.1
+0.2
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