Fitness for 5 genes in Dickeya dianthicola 67-19

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 39 experiments or choose conditions or try the comparative fitness browser

500 ntHGI48_RS11970 and HGI48_RS11975 are separated by 109 nucleotidesHGI48_RS11975 and HGI48_RS11980 are separated by 151 nucleotidesHGI48_RS11980 and HGI48_RS11985 are separated by 48 nucleotidesHGI48_RS11985 and HGI48_RS11990 are separated by 615 nucleotides HGI48_RS11970: HGI48_RS11970 - VOC family protein, at 2,610,459 to 2,610,890 _RS11970 HGI48_RS11975: HGI48_RS11975 - TetR/AcrR family transcriptional regulator, at 2,611,000 to 2,611,596 _RS11975 HGI48_RS11980: HGI48_RS11980 - hypothetical protein, at 2,611,748 to 2,612,740 _RS11980 HGI48_RS11985: HGI48_RS11985 - hypothetical protein, at 2,612,789 to 2,612,944 _RS11985 HGI48_RS11990: HGI48_RS11990 - L-threonine dehydrogenase, at 2,613,560 to 2,614,708 _RS11990
Group Condition HGI48_RS11970 HGI48_RS11975 HGI48_RS11980 HGI48_RS11985 HGI48_RS11990
control PDB -0.7 -0.1 +0.1 N.D. -0.2
carbon source M9+sucrose -0.3 -0.3 -0.1 N.D. -0.2
control PDB -0.3 -0.4 -0.0 N.D. +0.0
carbon source M9+sucrose -1.0 +0.1 +0.0 N.D. +0.2
plant Upstate -0.3 -0.1 +0.0 N.D. -0.1
plant Norland -0.4 -0.0 +0.0 N.D. -0.2
control LB -0.5 -0.1 +0.1 N.D. +0.1
control PDB -0.4 -0.2 +0.1 N.D. +0.1
plant Atlantic -0.4 -0.2 +0.1 N.D. +0.0
plant Upstate -0.1 -0.2 +0.3 N.D. -0.3
plant Atlantic -0.2 -0.7 +0.7 N.D. -0.1
carbon source M9+glycerol +0.1 -0.5 -0.0 N.D. +0.1
plant Norland -0.2 -0.2 +0.2 N.D. +0.0
plant Atlantic -0.1 -0.4 +0.2 N.D. +0.1
plant Upstate -0.5 -0.1 +0.2 N.D. +0.2
control LB -0.2 -0.1 +0.1 N.D. +0.1
control PDB +0.3 -0.3 -0.0 N.D. -0.0
plant Atlantic -0.6 +0.2 +0.4 N.D. -0.1
control LB +0.1 -0.3 +0.2 N.D. +0.1
control PDB +0.2 -0.2 -0.0 N.D. +0.0
plant Norland +0.3 -0.1 +0.1 N.D. -0.3
plant Atlantic -0.2 +0.1 +0.2 N.D. -0.0
plant Norland +0.4 -0.3 +0.0 N.D. +0.1
carbon source M9+sucrose +0.3 -0.2 -0.0 N.D. +0.0
carbon source M9+glycerol +0.3 +0.1 +0.0 N.D. +0.0
control PDB +0.6 -0.4 +0.0 N.D. +0.1
carbon source M9+polygalacturonate +0.6 -0.1 -0.2 N.D. +0.1
plant Norland +0.5 -0.1 +0.1 N.D. -0.0
plant Upstate +0.0 +0.3 +0.4 N.D. +0.1
plant Atlantic +0.7 +0.1 +0.1 N.D. +0.1
remove
HGI48_RS11970
plot
remove
HGI48_RS11975
plot
remove
HGI48_RS11980
remove
HGI48_RS11985
plot
remove
HGI48_RS11990
plot