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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS11970 and HGI48_RS11975 are separated by 109 nucleotides
HGI48_RS11975 and HGI48_RS11980 are separated by 151 nucleotides
HGI48_RS11980 and HGI48_RS11985 are separated by 48 nucleotides
HGI48_RS11985 and HGI48_RS11990 are separated by 615 nucleotides
HGI48_RS11970: HGI48_RS11970 - VOC family protein, at 2,610,459 to 2,610,890
_RS11970
HGI48_RS11975: HGI48_RS11975 - TetR/AcrR family transcriptional regulator, at 2,611,000 to 2,611,596
_RS11975
HGI48_RS11980: HGI48_RS11980 - hypothetical protein, at 2,611,748 to 2,612,740
_RS11980
HGI48_RS11985: HGI48_RS11985 - hypothetical protein, at 2,612,789 to 2,612,944
_RS11985
HGI48_RS11990: HGI48_RS11990 - L-threonine dehydrogenase, at 2,613,560 to 2,614,708
_RS11990
Group
Condition
HGI48
_RS11970
HGI48
_RS11975
HGI48
_RS11980
HGI48
_RS11985
HGI48
_RS11990
control
PDB
-0.7
-0.1
+0.1
N.D.
-0.2
carbon source
M9+sucrose
-0.3
-0.3
-0.1
N.D.
-0.2
control
PDB
-0.3
-0.4
-0.0
N.D.
+0.0
carbon source
M9+sucrose
-1.0
+0.1
+0.0
N.D.
+0.2
plant
Upstate
-0.3
-0.1
+0.0
N.D.
-0.1
plant
Norland
-0.4
-0.0
+0.0
N.D.
-0.2
control
LB
-0.5
-0.1
+0.1
N.D.
+0.1
control
PDB
-0.4
-0.2
+0.1
N.D.
+0.1
plant
Atlantic
-0.4
-0.2
+0.1
N.D.
+0.0
plant
Upstate
-0.1
-0.2
+0.3
N.D.
-0.3
plant
Atlantic
-0.2
-0.7
+0.7
N.D.
-0.1
carbon source
M9+glycerol
+0.1
-0.5
-0.0
N.D.
+0.1
plant
Norland
-0.2
-0.2
+0.2
N.D.
+0.0
plant
Atlantic
-0.1
-0.4
+0.2
N.D.
+0.1
plant
Upstate
-0.5
-0.1
+0.2
N.D.
+0.2
control
LB
-0.2
-0.1
+0.1
N.D.
+0.1
control
PDB
+0.3
-0.3
-0.0
N.D.
-0.0
plant
Atlantic
-0.6
+0.2
+0.4
N.D.
-0.1
control
LB
+0.1
-0.3
+0.2
N.D.
+0.1
control
PDB
+0.2
-0.2
-0.0
N.D.
+0.0
plant
Norland
+0.3
-0.1
+0.1
N.D.
-0.3
plant
Atlantic
-0.2
+0.1
+0.2
N.D.
-0.0
plant
Norland
+0.4
-0.3
+0.0
N.D.
+0.1
carbon source
M9+sucrose
+0.3
-0.2
-0.0
N.D.
+0.0
carbon source
M9+glycerol
+0.3
+0.1
+0.0
N.D.
+0.0
control
PDB
+0.6
-0.4
+0.0
N.D.
+0.1
carbon source
M9+polygalacturonate
+0.6
-0.1
-0.2
N.D.
+0.1
plant
Norland
+0.5
-0.1
+0.1
N.D.
-0.0
plant
Upstate
+0.0
+0.3
+0.4
N.D.
+0.1
plant
Atlantic
+0.7
+0.1
+0.1
N.D.
+0.1
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