Fitness for 5 genes in Dickeya dianthicola 67-19

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 39 experiments or choose conditions or try the comparative fitness browser

500 ntHGI48_RS11845 and HGI48_RS11850 are separated by 36 nucleotidesHGI48_RS11850 and HGI48_RS11855 are separated by 315 nucleotidesHGI48_RS11855 and HGI48_RS11860 are separated by 14 nucleotidesHGI48_RS11860 and HGI48_RS11865 are separated by 126 nucleotides HGI48_RS11845: HGI48_RS11845 - ABC transporter permease, at 2,586,863 to 2,588,134 _RS11845 HGI48_RS11850: HGI48_RS11850 - polyamine ABC transporter substrate-binding protein, at 2,588,171 to 2,589,202 _RS11850 HGI48_RS11855: HGI48_RS11855 - NAD-dependent succinate-semialdehyde dehydrogenase, at 2,589,518 to 2,590,978 _RS11855 HGI48_RS11860: HGI48_RS11860 - 4-aminobutyrate--2-oxoglutarate transaminase, at 2,590,993 to 2,592,258 _RS11860 HGI48_RS11865: HGI48_RS11865 - PLP-dependent aminotransferase family protein, at 2,592,385 to 2,593,872 _RS11865
Group Condition HGI48_RS11845 HGI48_RS11850 HGI48_RS11855 HGI48_RS11860 HGI48_RS11865
plant Atlantic -0.1 +0.0 +0.3 -0.1 -0.6
plant Upstate +0.0 +0.1 -0.2 -0.4 +0.0
plant Upstate -0.1 +0.1 -0.1 -0.3 +0.0
carbon source M9+polygalacturonate -0.3 -0.5 -0.1 +0.3 +0.3
plant Norland -0.1 +0.2 -0.0 -0.1 -0.3
carbon source M9+glycerol -0.3 -0.0 +0.1 +0.2 -0.1
carbon source M9+glycerol -0.1 +0.3 -0.0 -0.1 -0.2
control LB +0.1 +0.4 -0.1 -0.1 -0.4
plant Norland +0.1 +0.2 -0.1 -0.1 -0.1
plant Norland +0.1 +0.2 +0.1 -0.0 -0.3
plant Norland -0.2 +0.2 -0.1 +0.2 +0.1
carbon source M9+polygalacturonate +0.1 -0.2 +0.6 +0.1 -0.2
plant Norland +0.0 +0.5 +0.0 +0.0 -0.1
plant Atlantic +0.3 +0.3 -0.2 +0.1 -0.0
carbon source M9+polygalacturonate -0.1 +0.1 +0.1 +0.3 +0.2
plant Atlantic -0.0 +0.1 -0.1 +0.6 +0.1
carbon source M9+glycerol -0.2 +0.4 +0.2 +0.4 -0.1
plant Atlantic -0.1 +0.7 +0.3 +0.1 -0.2
plant Upstate +0.3 +0.1 +0.1 +0.3 +0.0
carbon source M9+glycerol +0.0 -0.0 +0.4 +0.5 +0.1
control PDB +0.3 +0.3 +0.1 +0.3 +0.0
control PDB +0.3 +0.4 +0.1 +0.3 -0.0
plant Upstate +0.1 +0.5 +0.2 +0.3 -0.1
carbon source M9+sucrose -0.0 +0.2 +0.2 +0.6 +0.1
control PDB +0.4 +0.5 -0.0 +0.4 +0.0
control PDB +0.4 +0.7 +0.1 +0.1 +0.1
control PDB +0.4 +0.7 -0.0 +0.4 -0.0
control PDB +0.4 +0.5 +0.1 +0.2 +0.2
carbon source M9+sucrose +0.1 -0.1 +0.4 +0.9 +0.3
carbon source M9+sucrose +0.1 +0.1 +0.7 +1.0 +0.4
remove
HGI48_RS11845
plot
remove
HGI48_RS11850
plot
remove
HGI48_RS11855
remove
HGI48_RS11860
plot
remove
HGI48_RS11865
plot