Fitness for 5 genes in Dickeya dianthicola 67-19

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 39 experiments or choose conditions or try the comparative fitness browser

500 ntHGI48_RS11375 and HGI48_RS11380 are separated by 261 nucleotidesHGI48_RS11380 and HGI48_RS11385 are separated by 44 nucleotidesHGI48_RS11385 and HGI48_RS11390 overlap by 8 nucleotidesHGI48_RS11390 and HGI48_RS11395 are separated by 13 nucleotides HGI48_RS11375: HGI48_RS11375 - 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD, at 2,476,938 to 2,477,699 _RS11375 HGI48_RS11380: HGI48_RS11380 - pectate lyase, at 2,477,961 to 2,479,592 _RS11380 HGI48_RS11385: HGI48_RS11385 - sugar ABC transporter permease, at 2,479,637 to 2,480,527 _RS11385 HGI48_RS11390: HGI48_RS11390 - carbohydrate ABC transporter permease, at 2,480,520 to 2,481,422 _RS11390 HGI48_RS11395: HGI48_RS11395 - sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC, at 2,481,436 to 2,482,563 _RS11395
Group Condition HGI48_RS11375 HGI48_RS11380 HGI48_RS11385 HGI48_RS11390 HGI48_RS11395
plant Atlantic -3.5 +0.1 +0.1 -0.5 +0.3
plant Atlantic -2.4 -0.0 -0.4 -0.5 +0.1
plant Atlantic -1.5 -0.4 +0.1 -0.7 -0.4
plant Atlantic -2.1 +0.2 -0.2 -0.3 +0.0
plant Norland -1.9 -0.2 -0.2 -0.0 +0.1
plant Upstate -2.0 -0.1 +0.1 -0.2 +0.0
plant Upstate -1.9 -0.0 -0.1 -0.1 +0.2
plant Upstate -1.8 -0.1 -0.2 -0.2 +0.2
plant Norland -1.8 +0.1 -0.3 -0.2 +0.3
plant Atlantic -1.4 -0.1 -0.2 -0.2 +0.2
carbon source M9+polygalacturonate -2.5 +0.1 +0.1 +0.4 +0.2
plant Atlantic -1.4 -0.2 -0.1 -0.1 +0.2
carbon source M9+polygalacturonate -1.8 -0.1 +0.4 -0.3 +0.4
plant Norland -1.5 +0.1 -0.2 +0.1 +0.1
control PDB -0.7 -0.1 -0.3 -0.2 +0.0
carbon source M9+glycerol -0.4 +0.0 -0.0 -0.6 -0.2
plant Norland -1.1 +0.1 +0.2 -0.3 +0.1
plant Norland -1.3 +0.4 -0.0 -0.3 +0.0
control PDB -0.4 -0.3 -0.1 -0.2 +0.0
control PDB -0.7 -0.2 -0.0 -0.0 +0.1
carbon source M9+glycerol -0.2 -0.3 +0.0 -0.2 -0.1
control PDB -1.1 -0.1 +0.2 -0.0 +0.4
plant Upstate -0.5 +0.0 -0.1 -0.1 +0.1
carbon source M9+glycerol -0.4 +0.1 -0.3 +0.0 +0.0
plant Norland -0.5 +0.4 -0.1 -0.1 -0.1
control LB -0.5 +0.1 -0.1 -0.0 +0.1
carbon source M9+glycerol -0.1 -0.4 -0.2 +0.3 +0.1
control PDB -0.5 +0.1 +0.0 -0.1 +0.2
carbon source M9+polygalacturonate -1.9 +0.0 +0.6 +0.7 +0.8
carbon source M9+sucrose +0.8 +0.2 +0.2 +0.1 +0.2
remove
HGI48_RS11375
plot
remove
HGI48_RS11380
plot
remove
HGI48_RS11385
remove
HGI48_RS11390
plot
remove
HGI48_RS11395
plot