Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS11355 and HGI48_RS11360 are separated by 42 nucleotidesHGI48_RS11360 and HGI48_RS11365 are separated by 254 nucleotidesHGI48_RS11365 and HGI48_RS11370 are separated by 323 nucleotidesHGI48_RS11370 and HGI48_RS11375 are separated by 180 nucleotides HGI48_RS11355: HGI48_RS11355 - fructosamine kinase family protein, at 2,473,562 to 2,474,419 _RS11355 HGI48_RS11360: HGI48_RS11360 - YniB family protein, at 2,474,462 to 2,475,010 _RS11360 HGI48_RS11365: HGI48_RS11365 - cupin domain-containing protein, at 2,475,265 to 2,475,597 _RS11365 HGI48_RS11370: HGI48_RS11370 - 5-dehydro-4-deoxy-D-glucuronate isomerase, at 2,475,921 to 2,476,757 _RS11370 HGI48_RS11375: HGI48_RS11375 - 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD, at 2,476,938 to 2,477,699 _RS11375
Group Condition HGI48_RS11355 HGI48_RS11360 HGI48_RS11365 HGI48_RS11370 HGI48_RS11375
carbon source M9+polygalacturonate +0.1 -0.6 -1.5 -1.1 -2.5
plant Atlantic -0.5 -0.1 -0.0 -0.6 -3.5
plant Atlantic +0.1 -0.9 -0.2 -1.0 -2.4
carbon source M9+polygalacturonate +0.4 -0.4 -0.6 -1.4 -1.9
carbon source M9+polygalacturonate +0.5 -0.3 -0.9 -1.3 -1.8
plant Upstate -0.4 +0.0 -0.3 -0.5 -1.9
plant Atlantic -0.1 -0.0 -0.2 -0.3 -2.1
plant Atlantic -0.1 -0.4 +0.1 -0.6 -1.5
plant Upstate -0.2 +0.3 -0.3 -0.5 -1.8
plant Norland -0.2 -0.1 +0.1 -0.3 -1.9
plant Upstate +0.0 +0.2 -0.2 -0.4 -2.0
plant Norland -0.2 +0.1 -0.0 -0.4 -1.8
plant Atlantic +0.1 -0.2 -0.4 -0.2 -1.4
plant Norland -0.2 -0.5 -0.0 -0.3 -1.1
plant Atlantic -0.1 -0.2 -0.0 -0.3 -1.4
plant Norland -0.3 +0.1 -0.2 -0.4 -1.3
plant Norland +0.2 +0.0 -0.2 -0.4 -1.5
plant Upstate -0.3 -0.1 -0.2 -0.5 -0.5
control PDB -0.1 -0.1 -0.2 -0.2 -0.7
plant Upstate -0.2 -0.1 -0.2 -0.3 -0.4
control LB -0.3 -0.1 -0.2 -0.0 -0.5
control PDB -0.4 +0.0 -0.4 -0.0 -0.4
carbon source M9+sucrose -0.2 -0.3 -0.2 -0.2 -0.2
control PDB -0.2 -0.3 -0.0 +0.2 -0.7
control PDB -0.0 +0.1 -0.0 +0.0 -1.1
plant Norland +0.1 +0.2 -0.3 -0.2 -0.5
carbon source M9+glycerol -0.3 +0.3 -0.2 +0.0 -0.5
carbon source M9+sucrose -0.2 -1.0 -0.0 -0.2 +0.8
control PDB -0.3 +0.0 -0.3 -0.1 +0.4
carbon source M9+glycerol -0.0 +0.4 +0.3 +0.0 +0.3
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