Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS11115 and HGI48_RS11120 are separated by 222 nucleotidesHGI48_RS11120 and HGI48_RS11125 are separated by 128 nucleotidesHGI48_RS11125 and HGI48_RS11130 are separated by 13 nucleotidesHGI48_RS11130 and HGI48_RS11135 are separated by 245 nucleotides HGI48_RS11115: HGI48_RS11115 - AvrE-family type 3 secretion system effector, at 2,415,090 to 2,419,970 _RS11115 HGI48_RS11120: HGI48_RS11120 - type III effector protein, at 2,420,193 to 2,421,272 _RS11120 HGI48_RS11125: HGI48_RS11125 - pectate lyase, at 2,421,401 to 2,423,218 _RS11125 HGI48_RS11130: HGI48_RS11130 - DNA-binding protein, at 2,423,232 to 2,423,564 _RS11130 HGI48_RS11135: HGI48_RS11135 - SDR family oxidoreductase, at 2,423,810 to 2,424,484 _RS11135
Group Condition HGI48_RS11115 HGI48_RS11120 HGI48_RS11125 HGI48_RS11130 HGI48_RS11135
carbon source M9+glycerol -0.0 N.D. -0.5 -0.2 -0.5
carbon source M9+glycerol +0.1 N.D. +0.1 -0.2 -0.9
carbon source M9+glycerol -0.0 N.D. -0.1 -0.5 -0.3
carbon source M9+glycerol -0.0 N.D. -0.6 +0.1 -0.3
carbon source M9+glycerol -0.1 N.D. -0.0 -0.6 -0.1
plant Norland +0.0 N.D. -0.3 +0.0 -0.5
plant Upstate +0.1 N.D. -0.3 +0.3 -0.5
carbon source M9+polygalacturonate -0.0 N.D. -0.1 +0.5 -0.7
plant Norland +0.0 N.D. +0.1 +0.2 -0.5
control PDB +0.1 N.D. -0.1 +0.4 -0.2
carbon source M9+sucrose +0.1 N.D. -0.2 +0.4 -0.2
carbon source M9+polygalacturonate -0.2 N.D. +0.3 +0.3 -0.2
carbon source M9+polygalacturonate -0.2 N.D. -0.2 +0.6 -0.1
plant Atlantic +0.1 N.D. -0.7 +0.2 +0.6
plant Upstate +0.1 N.D. -0.3 +0.2 +0.1
plant Norland +0.1 N.D. +0.1 +0.4 -0.4
plant Atlantic +0.0 N.D. -0.3 +0.5 -0.0
control LB +0.1 N.D. -0.0 +0.4 -0.2
plant Norland +0.1 N.D. -0.1 +0.7 -0.3
plant Norland +0.1 N.D. +0.1 +0.4 -0.1
plant Upstate +0.2 N.D. -0.0 +0.7 -0.3
plant Atlantic +0.3 N.D. +0.5 +0.3 -0.3
control PDB +0.3 N.D. +0.0 +0.2 +0.1
control PDB +0.2 N.D. +0.2 +0.2 +0.2
carbon source M9+sucrose -0.1 N.D. +0.1 +1.2 -0.3
plant Atlantic -0.1 N.D. +0.1 +0.5 +0.4
control LB +0.1 N.D. +0.0 +0.8 +0.1
plant Norland +0.0 N.D. -0.1 +1.1 +0.2
control PDB +0.1 N.D. +0.2 +0.6 +0.3
control PDB +0.3 N.D. +0.1 +0.9 +0.3
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