Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS11105 and HGI48_RS11110 are separated by 348 nucleotidesHGI48_RS11110 and HGI48_RS11115 are separated by 36 nucleotidesHGI48_RS11115 and HGI48_RS11120 are separated by 222 nucleotidesHGI48_RS11120 and HGI48_RS11125 are separated by 128 nucleotides HGI48_RS11105: HGI48_RS11105 - exodeoxyribonuclease V subunit gamma, at 2,410,761 to 2,414,237 _RS11105 HGI48_RS11110: HGI48_RS11110 - CesT family type III secretion system chaperone, at 2,414,586 to 2,415,053 _RS11110 HGI48_RS11115: HGI48_RS11115 - AvrE-family type 3 secretion system effector, at 2,415,090 to 2,419,970 _RS11115 HGI48_RS11120: HGI48_RS11120 - type III effector protein, at 2,420,193 to 2,421,272 _RS11120 HGI48_RS11125: HGI48_RS11125 - pectate lyase, at 2,421,401 to 2,423,218 _RS11125
Group Condition HGI48_RS11105 HGI48_RS11110 HGI48_RS11115 HGI48_RS11120 HGI48_RS11125
carbon source M9+polygalacturonate N.D. -1.2 -0.2 N.D. +0.3
plant Norland N.D. -0.7 +0.0 N.D. -0.3
plant Upstate N.D. -0.9 -0.1 N.D. +0.0
carbon source M9+sucrose N.D. -0.8 +0.1 N.D. -0.2
plant Upstate N.D. -1.0 +0.2 N.D. -0.0
carbon source M9+glycerol N.D. -0.9 +0.1 N.D. +0.1
plant Atlantic N.D. +0.0 +0.1 N.D. -0.7
plant Upstate N.D. -0.3 +0.1 N.D. -0.3
plant Upstate N.D. -0.2 +0.1 N.D. -0.3
plant Norland N.D. -0.4 +0.1 N.D. -0.1
carbon source M9+sucrose N.D. -0.3 -0.1 N.D. +0.1
carbon source M9+glycerol N.D. +0.2 -0.0 N.D. -0.5
plant Norland N.D. -0.4 +0.1 N.D. +0.1
plant Norland N.D. -0.3 +0.1 N.D. +0.1
carbon source M9+sucrose N.D. -0.4 +0.1 N.D. +0.2
carbon source M9+glycerol N.D. +0.6 -0.0 N.D. -0.6
control PDB N.D. -0.3 +0.2 N.D. +0.2
plant Atlantic N.D. +0.4 +0.0 N.D. -0.3
plant Atlantic N.D. -0.3 +0.3 N.D. +0.5
carbon source M9+glycerol N.D. +0.5 +0.1 N.D. -0.0
control LB N.D. +0.6 +0.0 N.D. -0.1
control LB N.D. +0.5 +0.1 N.D. +0.0
plant Upstate N.D. +0.4 +0.0 N.D. +0.2
plant Atlantic N.D. +0.6 -0.1 N.D. +0.1
plant Atlantic N.D. +0.7 +0.0 N.D. +0.0
control PDB N.D. +0.4 +0.3 N.D. +0.0
control PDB N.D. +0.4 +0.1 N.D. +0.2
plant Atlantic N.D. +0.8 +0.1 N.D. -0.0
control PDB N.D. +0.5 +0.2 N.D. +0.2
control PDB N.D. +0.7 +0.3 N.D. +0.1
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