Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS11070 and HGI48_RS11075 overlap by 14 nucleotidesHGI48_RS11075 and HGI48_RS11080 overlap by 4 nucleotidesHGI48_RS11080 and HGI48_RS11085 are separated by 62 nucleotidesHGI48_RS11085 and HGI48_RS11090 are separated by 307 nucleotides HGI48_RS11070: HGI48_RS11070 - tetratricopeptide repeat protein, at 2,401,037 to 2,401,588 _RS11070 HGI48_RS11075: HGI48_RS11075 - sigma-70 family RNA polymerase sigma factor, at 2,401,575 to 2,402,126 _RS11075 HGI48_RS11080: HGI48_RS11080 - hypothetical protein, at 2,402,123 to 2,402,932 _RS11080 HGI48_RS11085: HGI48_RS11085 - YceI family protein, at 2,402,995 to 2,403,570 _RS11085 HGI48_RS11090: HGI48_RS11090 - hypothetical protein, at 2,403,878 to 2,404,318 _RS11090
Group Condition HGI48_RS11070 HGI48_RS11075 HGI48_RS11080 HGI48_RS11085 HGI48_RS11090
carbon source M9+polygalacturonate -0.2 +0.2 -0.2 +0.5 -1.4
control PDB +0.2 +0.1 -0.2 -0.2 -0.7
control LB +0.1 -0.2 -0.1 +0.1 -0.8
plant Upstate -0.1 -0.0 -0.5 +0.1 -0.2
carbon source M9+sucrose +0.2 -0.3 +0.2 -0.3 -0.3
control PDB +0.2 +0.4 -0.1 +0.1 -1.0
plant Norland +0.0 -0.1 -0.1 +0.1 -0.4
control PDB +0.0 +0.2 -0.2 +0.1 -0.5
carbon source M9+polygalacturonate +0.2 +0.2 -0.3 +0.2 -0.6
control PDB +0.1 -0.4 -0.3 +0.1 +0.2
plant Atlantic -0.0 -0.1 -0.3 +0.3 -0.2
plant Atlantic -0.2 -0.2 -0.2 -0.1 +0.4
plant Upstate +0.1 -0.0 -0.1 +0.2 -0.4
carbon source M9+glycerol +0.1 -0.1 +0.3 -0.7 +0.2
plant Norland +0.0 +0.0 -0.1 -0.4 +0.2
carbon source M9+polygalacturonate +0.2 +0.3 +0.1 -0.4 -0.3
control PDB +0.2 -0.1 +0.2 +0.1 -0.6
carbon source M9+glycerol +0.1 -0.3 +0.4 +0.0 -0.2
plant Atlantic +0.1 -0.4 -0.2 +0.2 +0.4
control PDB +0.3 +0.1 +0.0 +0.4 -0.5
plant Norland +0.3 +0.4 -0.4 +0.1 -0.2
plant Atlantic +0.1 -0.2 -0.2 +0.2 +0.5
plant Upstate +0.2 -0.2 +0.1 +0.1 +0.2
carbon source M9+glycerol +0.2 +0.0 +0.3 -0.2 +0.3
carbon source M9+sucrose -0.0 +0.0 +0.3 +0.2 +0.3
control LB +0.0 +0.1 -0.1 -0.1 +0.7
plant Norland +0.2 +0.1 +0.2 +0.1 +0.2
plant Atlantic +0.2 +0.7 +0.1 -0.7 +0.6
carbon source M9+glycerol +0.2 +0.1 +0.2 +0.4 +0.4
plant Atlantic +0.2 +0.2 -0.5 +0.3 +1.6
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