Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS10655 and HGI48_RS10660 are separated by 3 nucleotidesHGI48_RS10660 and HGI48_RS10665 are separated by 236 nucleotidesHGI48_RS10665 and HGI48_RS10670 are separated by 138 nucleotidesHGI48_RS10670 and HGI48_RS10675 are separated by 116 nucleotides HGI48_RS10655: HGI48_RS10655 - class II fumarate hydratase, at 2,301,309 to 2,302,706 _RS10655 HGI48_RS10660: HGI48_RS10660 - DNA replication terminus site-binding protein, at 2,302,710 to 2,303,636 _RS10660 HGI48_RS10665: HGI48_RS10665 - MFS transporter, at 2,303,873 to 2,305,123 _RS10665 HGI48_RS10670: HGI48_RS10670 - LysR family transcriptional regulator, at 2,305,262 to 2,306,176 _RS10670 HGI48_RS10675: HGI48_RS10675 - ROK family transcriptional regulator, at 2,306,293 to 2,307,510 _RS10675
Group Condition HGI48_RS10655 HGI48_RS10660 HGI48_RS10665 HGI48_RS10670 HGI48_RS10675
plant Atlantic -1.0 +0.2 -0.1 -0.1 +0.0
control PDB -0.1 -0.5 +0.2 -0.3 -0.2
plant Norland -0.6 +0.2 +0.2 -0.2 -0.0
plant Norland -0.0 +0.0 +0.0 -0.3 -0.2
plant Upstate -0.2 +0.0 +0.0 -0.4 +0.1
control PDB -0.2 -0.4 +0.0 +0.1 -0.0
plant Atlantic -0.8 +0.3 +0.1 -0.2 +0.2
carbon source M9+glycerol -0.4 +0.1 +0.1 -0.1 -0.1
plant Upstate -0.6 +0.2 -0.0 +0.0 +0.1
plant Norland +0.2 -0.3 +0.1 -0.1 -0.1
carbon source M9+sucrose -0.1 -0.1 +0.2 -0.1 -0.1
plant Norland -0.2 -0.2 -0.0 +0.1 +0.2
plant Norland -0.5 +0.1 +0.4 -0.1 -0.1
plant Upstate -0.5 -0.0 +0.2 +0.1 +0.2
control PDB -0.1 -0.1 +0.0 -0.2 +0.2
carbon source M9+glycerol -0.3 -0.0 +0.0 -0.1 +0.2
plant Atlantic +0.2 -0.2 +0.0 +0.1 -0.2
control PDB +0.2 -0.3 +0.1 +0.0 -0.1
carbon source M9+glycerol -0.0 -0.5 +0.1 +0.2 +0.2
control LB -0.3 -0.1 +0.0 +0.3 +0.1
plant Atlantic +0.4 -0.5 -0.3 +0.2 +0.2
carbon source M9+polygalacturonate +0.1 +0.3 -0.1 -0.4 +0.2
carbon source M9+sucrose +0.3 +0.2 +0.1 +0.1 -0.4
carbon source M9+glycerol +0.2 -0.1 -0.0 -0.0 +0.3
plant Upstate +0.4 +0.2 -0.1 -0.4 +0.3
carbon source M9+polygalacturonate +0.2 +0.5 +0.0 -0.4 +0.2
plant Atlantic -0.0 +0.3 -0.1 +0.3 +0.2
plant Upstate +0.2 +0.1 +0.2 -0.1 +0.2
carbon source M9+polygalacturonate +0.2 +0.2 +0.0 -0.3 +0.6
carbon source M9+sucrose +0.4 +0.0 +0.4 +0.4 +0.1
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