Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS10360 and HGI48_RS10365 are separated by 385 nucleotidesHGI48_RS10365 and HGI48_RS10370 are separated by 451 nucleotidesHGI48_RS10370 and HGI48_RS10375 are separated by 545 nucleotidesHGI48_RS10375 and HGI48_RS10380 are separated by 1073 nucleotides HGI48_RS10360: HGI48_RS10360 - DNA-binding transcriptional regulator H-NS, at 2,233,875 to 2,234,282 _RS10360 HGI48_RS10365: HGI48_RS10365 - thymidine kinase, at 2,234,668 to 2,235,267 _RS10365 HGI48_RS10370: HGI48_RS10370 - bifunctional acetaldehyde-CoA/alcohol dehydrogenase, at 2,235,719 to 2,238,421 _RS10370 HGI48_RS10375: HGI48_RS10375 - YchE family NAAT transporter, at 2,238,967 to 2,239,611 _RS10375 HGI48_RS10380: HGI48_RS10380 - oligopeptide ABC transporter substrate-binding protein OppA, at 2,240,685 to 2,242,328 _RS10380
Group Condition HGI48_RS10360 HGI48_RS10365 HGI48_RS10370 HGI48_RS10375 HGI48_RS10380
carbon source M9+glycerol N.D. +0.9 -0.0 -2.3 +0.3
plant Norland N.D. +0.5 -0.1 -1.0 -0.2
plant Atlantic N.D. +0.6 +0.1 -1.3 -0.2
carbon source M9+polygalacturonate N.D. +0.8 -0.1 -0.7 -0.3
plant Norland N.D. +0.7 -0.0 -0.9 -0.1
control PDB N.D. +0.7 +0.0 -0.6 -0.4
plant Atlantic N.D. +0.5 -0.1 -0.7 +0.0
carbon source M9+polygalacturonate N.D. +0.8 -0.1 -0.9 -0.0
plant Atlantic N.D. +0.3 +0.1 -0.4 -0.1
control PDB N.D. +0.6 -0.1 -0.1 -0.4
plant Upstate N.D. +0.4 +0.0 -0.5 -0.0
carbon source M9+sucrose N.D. +0.7 +0.1 -0.6 -0.2
plant Upstate N.D. +0.3 +0.1 -0.5 +0.0
control PDB N.D. +0.6 -0.0 -0.2 -0.3
carbon source M9+sucrose N.D. +0.5 -0.0 -0.3 +0.1
plant Norland N.D. +0.6 +0.0 -0.2 -0.2
carbon source M9+polygalacturonate N.D. +1.0 -0.1 -0.3 -0.3
plant Upstate N.D. +0.7 +0.0 -0.2 -0.1
carbon source M9+glycerol N.D. +0.7 +0.0 -0.3 +0.1
carbon source M9+glycerol N.D. +0.7 +0.0 -0.5 +0.3
plant Upstate N.D. +0.8 -0.0 -0.2 +0.0
plant Norland N.D. +0.6 -0.1 -0.2 +0.2
plant Atlantic N.D. +0.4 -0.2 +0.5 -0.2
control PDB N.D. +0.8 -0.0 +0.1 -0.3
control PDB N.D. +0.6 +0.2 +0.2 -0.3
control PDB N.D. +1.0 +0.1 -0.1 -0.2
carbon source M9+glycerol N.D. +1.1 +0.0 -0.3 +0.2
carbon source M9+glycerol N.D. +1.2 +0.2 -0.2 +0.1
carbon source M9+glycerol N.D. +1.4 +0.2 -0.3 +0.0
carbon source M9+sucrose N.D. +0.7 +0.1 +0.6 -0.0
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